| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0839 |
|---|
| Symbol | |
|---|
| ID | 3737026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 808492 |
|---|
| End bp | 809487 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637775436 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_381162 |
|---|
| Protein GI | 78212383 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.528098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00311805 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGC TCTTTTACGA CTCCGACGCC GATCTCGGTC TGCTGAACGG CAAGACCGTG
GCCATCATTG GTTATGGCTC CCAGGGTCAT GCCCACGCTC TGAACCTGAA GGATTCAGGC
GTGAACGTGG TGGTGGGCCT TTATGACGGC AGCCGCTCCG CCGAGAAAGC CAAGGCAGAC
GGTCTCGAAG TGCTGAGCGT GGCCGATGCC TCAGCCAAGG CCGACTGGAT CATGGTCTTG
CTGCCCGACG AATTCCAGAA GGACGTATAC GAGAAGGAAA TCGCACCCCA CCTCAATGCA
GGCAAGGTGC TCAGCTTTGC TCACGGCTTC AACATCCGTT TCGAGCTGAT CAAGCCTCCC
GCCGATGTGG ATGTGGTGAT GATTGCCCCC AAGGGCCCCG GCCACACCGT GCGCTGGGAG
TACCAGAACG GCCAGGGCGT GCCTGCCTTG TTCGCCATCG AACAGGACGC CTCCGGCAAC
GCCCGCGGCA TGGCCATGGC CTACGCCAAG GGAATCGGTG GCACCCGTGC TGGAATCCTG
GAGACCAACT TCAAGGAAGA GACCGAAACC GATCTGTTCG GTGAACAGGC TGTGCTGTGT
GGCGGTCTGT CCGAACTGGT GAAGGCTGGT TTCGAGACCC TGGTGGAGGC GGGTTATCAG
CCCGAACTGG CTTACTTCGA GTGCCTGCAC GAGGTGAAGC TGATTGTGGA TCTGATGGTG
AAGGGAGGAC TGACCTCCAT GCGCGACTCG ATCTCCAACA CCGCTGAGTA CGGCGATTAC
GTCAGCGGCC CCCGTCTGAT CACCGCCGAC ACCAAGGCTG AGATGAAGCG CGTTCTGGCA
GACATCCAGG ACGGCACCTT TGCCAGGAAC TTCGTGGCCG AATGCGAAGC CGGTAAGCCA
GAGATGAAGA AGGTGCGCGA CCGTGATTCC CAGCATCCGA TCGAGAAAGT GGGCAAAGGC
CTGCGCTCGA TGTTCAGCTG GCTGAAGGAC GCCTGA
|
|---|
| Protein sequence | MAQLFYDSDA DLGLLNGKTV AIIGYGSQGH AHALNLKDSG VNVVVGLYDG SRSAEKAKAD
GLEVLSVADA SAKADWIMVL LPDEFQKDVY EKEIAPHLNA GKVLSFAHGF NIRFELIKPP
ADVDVVMIAP KGPGHTVRWE YQNGQGVPAL FAIEQDASGN ARGMAMAYAK GIGGTRAGIL
ETNFKEETET DLFGEQAVLC GGLSELVKAG FETLVEAGYQ PELAYFECLH EVKLIVDLMV
KGGLTSMRDS ISNTAEYGDY VSGPRLITAD TKAEMKRVLA DIQDGTFARN FVAECEAGKP
EMKKVRDRDS QHPIEKVGKG LRSMFSWLKD A
|
|---|
| |