Gene Syncc9605_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0805 
Symbol 
ID3737316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp769244 
End bp771286 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content60% 
IMG OID637775401 
Productpenicillin-binding protein 1A 
Protein accessionYP_381128 
Protein GI78212349 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0444532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0112407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGTT CTCGCCTTCA CTGGGCACTG ATCGCTGGCA CAGCAGCTGC GGTGGGCGTG 
GGAGCTGCCC TGGGCATGCG CGCACTAACG GAACTGGTGG ATGCCAAGCT TCCGGATGCC
CGCGGGATAG CCAGCTTCAA TCGGCCGGGA ACGATCACCC TGCTCTCCAC CAATGGCAAG
GTGATCCAGA AGCTGGGTCC AGCGACACGA GAGAAGGTGA AGCTCGGTGC GATGCCGCCG
ACGGTGGCGG AAGCGTTCAT CGCCGCCGAA GACCGGCGCT TCTATCAGCA CGACGGTGTG
GATGGCTGGG GCATCGCGAG GGCCATCGTC ACCAATGTCC GCCAGGGCGC TGTTCGGGAA
GGGGCGAGCA CCATCACCCA GCAGCTGGCT CGAACCGTCT TTTTGAGCCA GGACCGCACG
ATCACCCGCA AACTCAAGGA AGCGGCTCTG GCCATGAAGC TGGAGCGGCA GCTGAGCAAG
CAGCAGATCC TCGAGCAATA CCTCAACTAC GTGTATCTGG GGTCCGGCGC CTACGGCGTT
GCCGATGCGG CGTGGATCTA CTTCTCCAAA ACCCCGGAGC AGCTCACGGT TCCTGAAGCG
GCCATGATCG CTGGGCTGCC ACCAGCTCCA TCGATTTATT CACCCCTGGT GAACCCAGAT
CTGGCGAAAG AACAGCGCTC GATCGTTCTG GATCGCATGG CCCAGGCCGG ATTCATCTCC
ACCAGCGAAG CGGAGCGCGG TCGCACCAGC CCGCTTGGAC TGAAGCCCGC AACACCCAAG
TACTTCAACA GTTCTGCGCC TTACTTCACC ACCTGGATTG CCCAGGAGCT GCCCAAATTC
TTGACGCCCG AACAACTGGA AGTGGGCGGG GTCAAGGTGC GCACCAGCCT GAATCTCGAC
TGGCAGAAAA AAGCTCAGCA GGTGATTCGA GCCAATGCCC CCTTCGACAC CGAAGGCGCG
ATGGTTTCGA TCGATCCCGG CAACGGGCTG GTGCGGGTGA TGGTGGGCGG CAAGGATTTC
TCCAAGAGCC AGTTCAACCG CACCATCCTG GCGCTGCGCT CTCCGGGCTC CACCTTCAAG
CTGTTTCCCT ACGCCGCGGC CATTGATCGG GGCATGAAGC CCGAAACCAA AGTGTTTGAT
GCGAAGCGTT GCTGGAATGG CTACTGCCCT AAAAACTTTG GCGATAAGTA CTACGGCAAC
ATCTCCCTTG CCGATGCCCT GAAGAATTCA CTCAACACGG TGGCGGTCCA ACTGCAAGAC
ATCGTCGGAT TTGAAGCCGT CATTGACATT GCCAACAACT TCAACATCGG CACCGAGCGA
CCTCTAGGCA AGTACTACCC CATGGCCATC GGGGCCTACG AGCAAACCAT CCTCGACATG
ACCGCCGCCT ATGCAGGAAT GGCCAATCGC GGAGTGTTCT TCACACCAAG CCCCTTCGAG
GAAATTCGCG GACCCAAGAA TGAGCTGCTT TGGAGCCGGC GCCTGAGCGA CAACCCAGGC
AAGCAGGCGA TTGATAGTGA TGTGGCAGAC ACCATGAACT GGATGCTGCA ACGGGTGGTA
ACCGGAGGCA CCGGCATCGC CGCAAAACTC GACGATCGCC AGGTGGCTGG AAAGACGGGA
ACGTCAGAAA ACACCCGTGA CCTCTGGTTC ATCGGCTCGA TTCCTCAGCT CACAACGGGC
GTCTGGTTCG GATACGACGA CGACCGCGCC ACCAAGAGCA CCAGCGGCGA GGCCGCATGG
GCTTGGAAGC AATTCATGCT TCAAATCAAG GACGAGATCC CTGTCCGCGC CTTCCCCGAC
AAACCAAAGA CGAAGCGAAA AGTGCGTTTG GCTGTCGATC CGAAAACGAT TGCCAAGCCA
CCGAAAACCA AACCGGAGCA GAAGGCCACC GCCGAGCAAG ATGCAGCTCA ACCGACGGTT
GAGACAGACC TGCCCGCTCT CACCCCCGTG GCACCTCCTG CTCGCCAGTC GCCTTACCTC
TGGAGAAACA GCGCTCCAGA CCGCAACATC GATCGCCAGG GACGCCGCTG GACACGGGAT
TGA
 
Protein sequence
MNRSRLHWAL IAGTAAAVGV GAALGMRALT ELVDAKLPDA RGIASFNRPG TITLLSTNGK 
VIQKLGPATR EKVKLGAMPP TVAEAFIAAE DRRFYQHDGV DGWGIARAIV TNVRQGAVRE
GASTITQQLA RTVFLSQDRT ITRKLKEAAL AMKLERQLSK QQILEQYLNY VYLGSGAYGV
ADAAWIYFSK TPEQLTVPEA AMIAGLPPAP SIYSPLVNPD LAKEQRSIVL DRMAQAGFIS
TSEAERGRTS PLGLKPATPK YFNSSAPYFT TWIAQELPKF LTPEQLEVGG VKVRTSLNLD
WQKKAQQVIR ANAPFDTEGA MVSIDPGNGL VRVMVGGKDF SKSQFNRTIL ALRSPGSTFK
LFPYAAAIDR GMKPETKVFD AKRCWNGYCP KNFGDKYYGN ISLADALKNS LNTVAVQLQD
IVGFEAVIDI ANNFNIGTER PLGKYYPMAI GAYEQTILDM TAAYAGMANR GVFFTPSPFE
EIRGPKNELL WSRRLSDNPG KQAIDSDVAD TMNWMLQRVV TGGTGIAAKL DDRQVAGKTG
TSENTRDLWF IGSIPQLTTG VWFGYDDDRA TKSTSGEAAW AWKQFMLQIK DEIPVRAFPD
KPKTKRKVRL AVDPKTIAKP PKTKPEQKAT AEQDAAQPTV ETDLPALTPV APPARQSPYL
WRNSAPDRNI DRQGRRWTRD