Gene Syncc9605_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0593 
Symbol 
ID3737582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp574372 
End bp574965 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content59% 
IMG OID637775192 
Producttwo component transcriptional regulator 
Protein accessionYP_380922 
Protein GI78212143 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.123862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCTCC AGCGTTCCTC CACACCCCCT CACCAGTTCG CGCGCCAAGG CGAGCCCCAA 
ACCAGGGCCC TCCACCCTTT CGCCATCCCG TTCGGGCTTG CCCCGGACAA ACGGCGCAGA
CCAGCGTTCC AGATCCTCCG AAGCCACAGG AGCGTCAAGG CTCTCGAAGC CGGCGTTGAT
GATTACCTGA TCAAGCCATT TTCCATCGAC GAATTAATGG CGCGCCTGCG GGCAATGCAC
CGCCGCGCTG AAACATTCTC AGGCCTCGTA GGCGGCCCAG ACGTCAACGA AATTCTCAAG
GTCGCCGACC TCAGCATGAA CACGCGAACC CGGGATGTGA TGCGGGGAGA TCGTGCGATC
CGACTGTCGG TGAAAGAATA CGACCTGCTG AATTTCCTGA TGCGGGGCGC AGGCCGCGTG
CTTGAACGCC AGGAAATCAT GCACGGTGTT TGGGGAGAAA ATTTTTGTGG GGACGACAAT
CTTCTCGACG TCTATATCAG CTACCTGCGT CAAAAAGTCG AACTGGATGA TGCGCCCACC
CTCATCCACA CCGTGCGCGG TGTTGGATTC ATCCTCAGGG AACAGACGAA CTGA
 
Protein sequence
MELQRSSTPP HQFARQGEPQ TRALHPFAIP FGLAPDKRRR PAFQILRSHR SVKALEAGVD 
DYLIKPFSID ELMARLRAMH RRAETFSGLV GGPDVNEILK VADLSMNTRT RDVMRGDRAI
RLSVKEYDLL NFLMRGAGRV LERQEIMHGV WGENFCGDDN LLDVYISYLR QKVELDDAPT
LIHTVRGVGF ILREQTN