Gene Syncc9605_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0554 
Symbol 
ID3737656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp536223 
End bp537812 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content56% 
IMG OID637775152 
Producthypothetical protein 
Protein accessionYP_380883 
Protein GI78212104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.169358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATAA TGAGGTTCCG CCGACTCCGT TCCATGCAAT CGCTCGACCA ACGTATGCAG 
CGTGTTGTAG TCCGGCGTCA GGAACTGGCA CAGCGATGGG ATGCTTTGCG GAACAACGAT
CTGTTCCAGC TGCTGGTCGT GACGTTGCCA GATTTGTTGC GGGCTGAGCG GTGCGGAGTG
TTTGTGCTCG ATCCCGATGC TGATGAGCTT TGGCTAGAGG CCGGCACGAA GGTTGTGCAA
CGACAGATCT GTGCTGACGT TGAGGGTTCG ATGGTGGGTG AGTGCGTAAG CACCGGCAGC
TGTGTCAACC GCTCAGGGCT GGAGATTTTG GAGGGAGCAC ACCAAAAAGT TGGTGAAGCT
CTTTCTTACA AGGTGTCCAC CGCGATCACT GTGCCTATCA ACGGAGATGC GTTGGAGGTT
GTCGGAGCGC TTCAAGTCTT GAACCGCATC GATGGAAAGC CCTTTTCTGC TGCTGACCAA
ACCCAACTGG AAGCGGTGGC CAATGCAATC CAGCCATCGG TGCAGGTCAT GTACGCAAGT
CGGGCACTGC AGCAGCGATC GCTCAAGCTT GATCACACCA TCGAAGTGCT GCGTGATCGC
CTCGAGGCGC TGCGTCCTGG CCACAGCTTC CGCACCTTTG AACCAGCACT TCTGGCCCAT
GAAGAAGGCT TCTTGCATCA CCGCTGGAAT GGTCGTTGCT ATCCACCATT CATCGACTAT
CGAGCTACCG AGCACCTCAC AAAGACTTGG GACACTCAGC CGAATGACGT GTTTTTAGCG
ACCCATCAGA AAGTTGGTAC CCATCTGGCG AAAAAATTTC TGGTGGAACT GGTGCGAGCC
AATGTTGAGC TGCCCGGCAG ACATCCGATG GTGGATGGTG ATATCGGTCA CGGAGCGATG
CCCTGGCCTG AGGTTCTGTT GTCCCAAGAG ACCCCCGGCG ATTGGCAACG GTTCCAGGCA
GCCACCTCGG ATTGCCCACG GCTTTGGTAT CTGCATTGCG CCGTTGACGA TTTGCCATGC
CGACGCATTC ATCCTCAAAC GCGTTTCGTT GTGGCCATTC GCGATCCGCG AGCCGCGCTG
GTTTCCCAGT ACTTTTTCTG GGTGCGCCAC CCACTTCTGC AAGTGGATCC CGAACTCGAA
CTGGATCGTT TCGCTGAGCT GTTTGTGCAG GGAGATCTCT ACTTCGGTAG TTATTTCCGT
CATATCCGCG GTTGGTTAAC ACCCGAACCC CGACTGCAGG CATCCCAGAT CTGTGCGCTT
CGTTATGAGG ACATGGTGGA GCGCAAAGCT GAAACCGTTG AGCAGCTTCA GCAGTTCCTT
TTCCCCTCAG CGACTTTGGA ACCAGAGCGG GCTGCAGCAA TTGCCGCTGG AACAGAGTTT
CAGGCCATGA AACAAGGCAT TACGGAGAAT CCAGGCAGTT TTCATCTCAA TCCCAAGCTG
TATTTTCGAG CGGGAACCAC AGACAATTGG CGTCAGCATC TGTCTCCTCG AGCCGAGGCG
TTGGTGGCGA CGGCCGCTCG GGAGCAGTGG GCAGGTATAG AGACGCATCC TCTGCTGGCA
GGCTATCTCG AGGAGCTTTC TGATCTTTAG
 
Protein sequence
MPIMRFRRLR SMQSLDQRMQ RVVVRRQELA QRWDALRNND LFQLLVVTLP DLLRAERCGV 
FVLDPDADEL WLEAGTKVVQ RQICADVEGS MVGECVSTGS CVNRSGLEIL EGAHQKVGEA
LSYKVSTAIT VPINGDALEV VGALQVLNRI DGKPFSAADQ TQLEAVANAI QPSVQVMYAS
RALQQRSLKL DHTIEVLRDR LEALRPGHSF RTFEPALLAH EEGFLHHRWN GRCYPPFIDY
RATEHLTKTW DTQPNDVFLA THQKVGTHLA KKFLVELVRA NVELPGRHPM VDGDIGHGAM
PWPEVLLSQE TPGDWQRFQA ATSDCPRLWY LHCAVDDLPC RRIHPQTRFV VAIRDPRAAL
VSQYFFWVRH PLLQVDPELE LDRFAELFVQ GDLYFGSYFR HIRGWLTPEP RLQASQICAL
RYEDMVERKA ETVEQLQQFL FPSATLEPER AAAIAAGTEF QAMKQGITEN PGSFHLNPKL
YFRAGTTDNW RQHLSPRAEA LVATAAREQW AGIETHPLLA GYLEELSDL