Gene Syncc9605_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0517 
Symbol 
ID3736762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp509041 
End bp509955 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content62% 
IMG OID637775115 
Productaspartoacylase 
Protein accessionYP_380846 
Protein GI78212067 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2988] Succinylglutamate desuccinylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0707886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.268536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCT GTGGCGTTCT TGTGGTGGCC GGTACCCATG GGAATGAGGT GAATGCCCCT 
TGGTTGCTGC AGCAGTGGCA GGCCAACCCT GATCTGATCG ACGCGGCTGG CTTGGCGGTC
CAGAAGGTGA TCGGCAACCC AGAAGCGTTG CGCCGCCGCT GCCGATACGT CGATCGTGAT
CTCAACCGCT GCTTCCTCCC GGAACAGCTG GAGCAGGGTG CCTCCGGATT GGAGTTCCAG
CGTGCTGGGG AACTCCTGCG TTTGCATGGC CCCAGTGGCG AGCAGCCCTG TGCTGTGGCC
ATCGATCTGC ACAGCACCAC TGCGGCCATG GGCAATTCCC TTGTGGTGTA CGGCCGGCGT
CCCGCTGATC TCGCCCTCGC GGCTTTGGTG CAGGGAGCGC TCGGCCTGCC GATTTATCTG
CACGAAGCCG ATGCTCAGCA GACTGGCTTC CTTGTTGAAT CCTGGCCCTG CGGACTGGTG
ATCGAGGTGG GGCCTGTGCC GCAAGGTCTG CTCAATGCCG GGGTCGTTGA ACAGACCCGT
CTTGGCTTGG AAAGCTGCCT CAGGGCCTTG TATCAGGTAC GTCAGGAGTT AGCCCGGCTG
CCGGATGCTC TGGTGGTGCA CCGTCACTTG GGGAGTCGGG ATCTTCCGAA GGCGGAGAAC
GGAGAGCCAC AGGCCCTTGT GCATCCCGAA CTGCAGGGCC GCGATTGGCA GAACATCGCC
TCAACCCAGG CCATGTTTCG TGCTGCTGAT GGGACCGACC GTTGTGAAGC TTGGGTTGGA
GGGGAAATTC CGGTGTTTGT GAACGAAGCG GCCTACGCGG AGAAAAGCAT TGCTTTCTCC
CTCACCCGCC GGGAGGTTTG GCCTGTGGAG CCCAACTGGC TACTGGCCCT CAAACAGCTG
CTCGCTGCGG CTTAA
 
Protein sequence
MSSCGVLVVA GTHGNEVNAP WLLQQWQANP DLIDAAGLAV QKVIGNPEAL RRRCRYVDRD 
LNRCFLPEQL EQGASGLEFQ RAGELLRLHG PSGEQPCAVA IDLHSTTAAM GNSLVVYGRR
PADLALAALV QGALGLPIYL HEADAQQTGF LVESWPCGLV IEVGPVPQGL LNAGVVEQTR
LGLESCLRAL YQVRQELARL PDALVVHRHL GSRDLPKAEN GEPQALVHPE LQGRDWQNIA
STQAMFRAAD GTDRCEAWVG GEIPVFVNEA AYAEKSIAFS LTRREVWPVE PNWLLALKQL
LAAA