Gene Syncc9605_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0400 
Symbol 
ID3736722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp401646 
End bp402995 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content64% 
IMG OID637774989 
Producthypothetical protein 
Protein accessionYP_380731 
Protein GI78211952 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.264302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGGGC CCTCCTTCAC CGCCCTGCGG CAACGGCTGG CGCAAGACGT GCCCCAGGGC 
CGCTGCGATG AGATTGGTGT TCGGCGGCTT TGGTGGGCTG CTCTGGAAAC CCTGCAACAG
GACCTGCTTG AGCGCGGCCT GGAACGCGGA ATCTGGCTGG CTGCCCCCCT GCCGGCTCTC
TATGAACCGG AGTTGCTCCA ACATCTGCAG GGATGGGTGT GGGCTCCGGA TCAACTGGAT
CAACTGAGTC CGCATCCAAC AGCACTGCCG GGACGGTCCA GCAGCGATGA GCCCGGTTCC
CTGCGGGGAT TCCAACGCTT GTCCCTGGGC CCCGACGACG GGGATGACCC ACTGCTACTA
GTGATCACGC CTGAGGTCCA GGTGGCCCTT GCGCTGCATG GGCCGGCCCA GAAGCGTCAG
CTGCTGATGC GTTGCGACCC GGCAACGCTC AGTGATGTTC TGGTGCAGCT GGGGGGTCGG
CTGGAGCACC AGTCACCAGC GCAGGCCGAG CAGCTGCGCA AAGCGCTCGA ATCGATCGGC
TCCCTGCAGA GCAATGCAGC CTGGTCAGAA CAGTTCTGGC CCCGTCTCAC CGAGCGGCTC
ACCGGCACAG CCCCTGGGCT GATGCTGCAA CCCATCCAGG CTGAGCGCCC ACCGGAAGCT
CCGAGCCATG GAGATCTGAA TTTACTGGAA GCGATCACCC ATGAGGTGCG AACCCCTCTG
GCCACGATCC GAACATTGAT CCGCTCTCTG CTGCGGCGGA AGGATCTGGC TGATGTCGTT
GTGAATCGCT TGCGGCAGAT CGATGTGGAA TGCAGCGAGC AGATCGATCG CTTTGGCCTG
ATCTTCCATG CCGCTGAACT GCAACGGGAG CCCAACGAGG CCAATCTGGC CCGCACTGAT
TTGCAAGCCA TGCTGAGCGC CCTTGCGCCC AGCTGGACGG AGCAGCTGGA CCGTCGCGGG
ATCGCCTTGG AGCTGGATCT CAGCGCTGAC CTGCCCGCGA TCCTGAGTGA TTCCCGGCGA
CTGGAACCGA TGCTGGGGGG TCTGATCGAC CGCAGCACCA GGGGGCTCCC CTCAGGAAGT
CAGCTCACGC TTCACCTCCA GGCAGCAGGT CCGCGGGTAA AGCTTCAGCT GCATGTGGAG
CATCCCGACA GGAGCCAGGC CACAGAGGCC GGCTCGGAGC CCCAGCGCGA AAACGTGGGG
ACCGTCCTCA GCTGGGATCC CAGCACCGGC AGCCTGCAGT TAAGCCAGGA TGCGACCCGC
CAGATGATGG CCAGCCTGGG GGGCCGCTAT CAGCCCAAGC GCGACCGCGA CATCACCGTT
TTTTTCCCGG TGCATACGCC CGGAGAGTGA
 
Protein sequence
MTGPSFTALR QRLAQDVPQG RCDEIGVRRL WWAALETLQQ DLLERGLERG IWLAAPLPAL 
YEPELLQHLQ GWVWAPDQLD QLSPHPTALP GRSSSDEPGS LRGFQRLSLG PDDGDDPLLL
VITPEVQVAL ALHGPAQKRQ LLMRCDPATL SDVLVQLGGR LEHQSPAQAE QLRKALESIG
SLQSNAAWSE QFWPRLTERL TGTAPGLMLQ PIQAERPPEA PSHGDLNLLE AITHEVRTPL
ATIRTLIRSL LRRKDLADVV VNRLRQIDVE CSEQIDRFGL IFHAAELQRE PNEANLARTD
LQAMLSALAP SWTEQLDRRG IALELDLSAD LPAILSDSRR LEPMLGGLID RSTRGLPSGS
QLTLHLQAAG PRVKLQLHVE HPDRSQATEA GSEPQRENVG TVLSWDPSTG SLQLSQDATR
QMMASLGGRY QPKRDRDITV FFPVHTPGE