Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0400 |
Symbol | |
ID | 3736722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 401646 |
End bp | 402995 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637774989 |
Product | hypothetical protein |
Protein accession | YP_380731 |
Protein GI | 78211952 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.264302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGGGC CCTCCTTCAC CGCCCTGCGG CAACGGCTGG CGCAAGACGT GCCCCAGGGC CGCTGCGATG AGATTGGTGT TCGGCGGCTT TGGTGGGCTG CTCTGGAAAC CCTGCAACAG GACCTGCTTG AGCGCGGCCT GGAACGCGGA ATCTGGCTGG CTGCCCCCCT GCCGGCTCTC TATGAACCGG AGTTGCTCCA ACATCTGCAG GGATGGGTGT GGGCTCCGGA TCAACTGGAT CAACTGAGTC CGCATCCAAC AGCACTGCCG GGACGGTCCA GCAGCGATGA GCCCGGTTCC CTGCGGGGAT TCCAACGCTT GTCCCTGGGC CCCGACGACG GGGATGACCC ACTGCTACTA GTGATCACGC CTGAGGTCCA GGTGGCCCTT GCGCTGCATG GGCCGGCCCA GAAGCGTCAG CTGCTGATGC GTTGCGACCC GGCAACGCTC AGTGATGTTC TGGTGCAGCT GGGGGGTCGG CTGGAGCACC AGTCACCAGC GCAGGCCGAG CAGCTGCGCA AAGCGCTCGA ATCGATCGGC TCCCTGCAGA GCAATGCAGC CTGGTCAGAA CAGTTCTGGC CCCGTCTCAC CGAGCGGCTC ACCGGCACAG CCCCTGGGCT GATGCTGCAA CCCATCCAGG CTGAGCGCCC ACCGGAAGCT CCGAGCCATG GAGATCTGAA TTTACTGGAA GCGATCACCC ATGAGGTGCG AACCCCTCTG GCCACGATCC GAACATTGAT CCGCTCTCTG CTGCGGCGGA AGGATCTGGC TGATGTCGTT GTGAATCGCT TGCGGCAGAT CGATGTGGAA TGCAGCGAGC AGATCGATCG CTTTGGCCTG ATCTTCCATG CCGCTGAACT GCAACGGGAG CCCAACGAGG CCAATCTGGC CCGCACTGAT TTGCAAGCCA TGCTGAGCGC CCTTGCGCCC AGCTGGACGG AGCAGCTGGA CCGTCGCGGG ATCGCCTTGG AGCTGGATCT CAGCGCTGAC CTGCCCGCGA TCCTGAGTGA TTCCCGGCGA CTGGAACCGA TGCTGGGGGG TCTGATCGAC CGCAGCACCA GGGGGCTCCC CTCAGGAAGT CAGCTCACGC TTCACCTCCA GGCAGCAGGT CCGCGGGTAA AGCTTCAGCT GCATGTGGAG CATCCCGACA GGAGCCAGGC CACAGAGGCC GGCTCGGAGC CCCAGCGCGA AAACGTGGGG ACCGTCCTCA GCTGGGATCC CAGCACCGGC AGCCTGCAGT TAAGCCAGGA TGCGACCCGC CAGATGATGG CCAGCCTGGG GGGCCGCTAT CAGCCCAAGC GCGACCGCGA CATCACCGTT TTTTTCCCGG TGCATACGCC CGGAGAGTGA
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Protein sequence | MTGPSFTALR QRLAQDVPQG RCDEIGVRRL WWAALETLQQ DLLERGLERG IWLAAPLPAL YEPELLQHLQ GWVWAPDQLD QLSPHPTALP GRSSSDEPGS LRGFQRLSLG PDDGDDPLLL VITPEVQVAL ALHGPAQKRQ LLMRCDPATL SDVLVQLGGR LEHQSPAQAE QLRKALESIG SLQSNAAWSE QFWPRLTERL TGTAPGLMLQ PIQAERPPEA PSHGDLNLLE AITHEVRTPL ATIRTLIRSL LRRKDLADVV VNRLRQIDVE CSEQIDRFGL IFHAAELQRE PNEANLARTD LQAMLSALAP SWTEQLDRRG IALELDLSAD LPAILSDSRR LEPMLGGLID RSTRGLPSGS QLTLHLQAAG PRVKLQLHVE HPDRSQATEA GSEPQRENVG TVLSWDPSTG SLQLSQDATR QMMASLGGRY QPKRDRDITV FFPVHTPGE
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