| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0378 |
|---|
| Symbol | |
|---|
| ID | 3736565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 378655 |
|---|
| End bp | 379686 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637774965 |
|---|
| Product | putative LdpA protein |
|---|
| Protein accession | YP_380709 |
|---|
| Protein GI | 78211930 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1142] Fe-S-cluster-containing hydrogenase components 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.955391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGAACCG ATGACCACAT ATCTGAAGGC CTGACGCCTG ACGACGCCCT CGCTCAGGGC
CTCTGGGTCA AGCTGATCTG TGGGGCAAGC AACCAGGATC TGCCTGCCAT TGCCGACCTG
ACCGCAGTCT TTGCGGCTGT TGGCGTTCAT TGCGTTGACG TGGCTGCCGA TCCAGCGGTC
GCTCTTGCAG CCCGTCGCGG CCTGGACTGG GCTGAGGCGC AAACAGGGCG TCGCCCCTGG
CTGATGGTGA GCCTCAGCGA TGGCACCGAT GCTCACTTCC GCAAGGCTTG GTTCGATCCT
GGTCGCTGCC CTGTGGACTG TCCGCGGCCA TGCGAAAGGA TTTGTCCGGC GGCAGCGATT
CCGCCCGGTG CTGGCATCGA CCAGCAGCGT TGCTATGGCT GCGGCCGCTG CCTGCCGGCT
TGCCCCCATG GGTTGATCGA GGAGCGCGAC CACCGCTTGG CGCCCGAGCA GGTGATCTCC
CTGCTCCAAT CGATTCAGCC CGATGCTCTG GAGATTCACA CCGCATCTGG GCATGACGAG
GGCTTCGCAA CGCTGATCCA AAGCCTTCAG CAGCACAAGG TTCCCTTGCG GCGCTTGGCT
GTGAGCTCCG GCTTGGAGGG CCACGGCGTG AAGGCCGATC AGTTGGCTGA TTTGCTTTGG
CGTCGCTACT CCCGCCTGCG GCAAGCCGGT TACAGACCCC TCTGGCAGCT GGATGGGCGT
CCGATGAGCG GCGATGTGGG GGCTGGCACC GCGCGGGCAG CAGTTCAGCT CTGGCGTGCC
ATGCGGAGTC TGGCCCCGCC GGGCCCGTTG CAGCTGGCCG GTGGTACCAA CGCCGCAACG
CTGGAGTTCT TGCGTCCCAC GGAACGGCCG GCTGGCATCG CCTTTGGTGG TGTGGCCCGT
CGCTTGCTGA TGCCTGTGCT GGATGAGGCG CAAACCCGTC GGCTCGCCCT GTGGCAATGG
CCCGAGGGTT GGGAGCGTGC CCTCTCCCTC GCGCGTCCAT TGGTGGCGCC ATGGCTGCAG
CGCTCTTGCT AG
|
|---|
| Protein sequence | MGTDDHISEG LTPDDALAQG LWVKLICGAS NQDLPAIADL TAVFAAVGVH CVDVAADPAV
ALAARRGLDW AEAQTGRRPW LMVSLSDGTD AHFRKAWFDP GRCPVDCPRP CERICPAAAI
PPGAGIDQQR CYGCGRCLPA CPHGLIEERD HRLAPEQVIS LLQSIQPDAL EIHTASGHDE
GFATLIQSLQ QHKVPLRRLA VSSGLEGHGV KADQLADLLW RRYSRLRQAG YRPLWQLDGR
PMSGDVGAGT ARAAVQLWRA MRSLAPPGPL QLAGGTNAAT LEFLRPTERP AGIAFGGVAR
RLLMPVLDEA QTRRLALWQW PEGWERALSL ARPLVAPWLQ RSC
|
|---|
| |