| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0313 |
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| Symbol | |
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| ID | 3737547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 318140 |
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| End bp | 320080 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637774897 |
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| Product | RNAse E |
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| Protein accession | YP_380644 |
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| Protein GI | 78211865 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGC AAATTGTCAT CGCGGAGCAG CTGCGCATCG CAGCAGTGCT AACCGATGAA
CGCGTTGATG AACTAATCGT CGCGCAGGGT CGTTATCAGA TCGGAGATGT CTATTTAGGA
ACGGTAGAAA ATGTTCTGCC AGGCATTGAT GCTGCCTTCG TCAATATCGG TGAGAGTGAG
AAAAACGGGT TCATTCATGT CACCGATCTT GGGCCGCTGC GTCTGAAGAA AGGTTCGGCT
GGGATCACTG AACTTCTGGA GCCTCGCCAA AAGGTTCTGG TTCAGGTGAT GAAAGAACCG
ACCGGCACCA AAGGCCCACG GTTGACGGGA AATCTGGCTC TGCCAGGTCG CTACCTGGTG
CTTCAGCCCC ATGGCCAGGG AGTCAATATC TCCCGGCGCA TCAGTTCCGA TGCAGAACGG
AACCGTCTGC GTGCACTGGG TGTTCTGATC AAGCCGCCTG GAGCTGGTCT GCTGATCCGT
ACGGAAGCCG ACAGCATCAG CGAAGAATTA TTGATTGAGG ATCTGGAATC CTTGCTACGC
CAGTGGGAGG CGATTCAGCA AGCCGCTGAA ACGGCTGCAC CGCCGGTGCT GCTCAACCGC
GACGAAGACT TCATCCATCG GATTCTGCGG GACCACATGG GCCCGGATCT GGCCCGGGTT
GTGGTGGAAG ATGCCGCCGC TGTGGGTCGT GTCAGCAGTT TCCTCGGTGC TGATGCCAGC
AATGTGCTGG TGGAAGCGCA CAGTGAACCC AGCGAGTTGC TGGAGCACTA CAAGGTCAAT
GCAGCTATCC GCGATGCGCT GAAGCCACGG GTTGATCTGC CGTCCGGTGG CTACGTGATC
ATCGAGCCCA CCGAAGCGCT CACTGTGATC GATGTGAACT CGGGCTCGTT CACACGGTCG
GCCAATGCGC GCGAAACTGT GCTGTGGACC AACTGTGAGG CGGCGATCGA AATCGCTCGC
CAGCTCAAGC TTCGCAACAT CGGTGGGGTA ATCATCATCG ACTTCATCGA TATGGATTCC
CGCCGTGATC AGCTCCAGCT GCTGGAGTAT TTCACGACAG CTGTCCGTGA CGACTCAGCC
CGCCCGCAGA TCGCACAGCT CAGCGAACTG GGCCTGGTGG AACTCACCCG CAAGCGACAA
GGGCAGAACA TCTATGAACT GTTCGGTCGG GCCTGCCCCA GCTGTGGTGG TTTGGGCCAT
GTGGCCGTTC TCCCCGGCAA AGACCTGCTT CAACCTCTGG CGACGGCCAC GGGATTGGTG
CGTTCGGCGG CCTCTGCCCG CGCCGAAGTT GTTGCGCCAG GAGAGAACGG TGGCAATGGC
CGTCGGCGGC GCGGTGGTCG AGGGCGCGGC AGTCAGGATG CCGTCCTTCC GCTAGAGACG
TCCGACACCG CTGCCCCTGA GGTCTCCACC CAAGAGGCTC AGGAGCCCGC GACTGCCCGT
CGTCAGGATC CTGAAATGGT TGCCGTCCCG ATGACGGACG AGCAACAGCA GTTGTTTGGT
TGGCTGGGGT TGAACCCTGC CCTGTTGCTG GAGGAGCCCC CTGCATCCGA CAACGTCGTT
GTCAGGGTTG TGCGTCCTGG TGAGGATGAG CAGGAGGTGC TTGAGGCGGC GCGTCAGCAA
TTGGCGGCCA GTTCCGGAAG GCGACGTCGT CGCGGCGGAC GGGGTGGTCG TTCTGGCTCA
CGCAATGGGG CGAGTCAGCC CACATCGAAC TCTTCTTCTG AGACGCCTGT TGTCGTGACC
TCATCCGCCC CGGATGAGGC GGCTCCCTTG ATGGTTGAGA TCACCCCCTT GGAGGCGGTG
ACCAATCTGA CGATCACCGA ACCAGAACCG GCTCCCATCA GCGAACCGGC TGAGCCCGAG
CCTGTGGCCG TGGTGGAACC AGCTGAGCCT GAGGAGCCTC GCCGTCGCCG TCGCCGCTCT
TCTGCTGTCG CCACGGTCTG A
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| Protein sequence | MPQQIVIAEQ LRIAAVLTDE RVDELIVAQG RYQIGDVYLG TVENVLPGID AAFVNIGESE
KNGFIHVTDL GPLRLKKGSA GITELLEPRQ KVLVQVMKEP TGTKGPRLTG NLALPGRYLV
LQPHGQGVNI SRRISSDAER NRLRALGVLI KPPGAGLLIR TEADSISEEL LIEDLESLLR
QWEAIQQAAE TAAPPVLLNR DEDFIHRILR DHMGPDLARV VVEDAAAVGR VSSFLGADAS
NVLVEAHSEP SELLEHYKVN AAIRDALKPR VDLPSGGYVI IEPTEALTVI DVNSGSFTRS
ANARETVLWT NCEAAIEIAR QLKLRNIGGV IIIDFIDMDS RRDQLQLLEY FTTAVRDDSA
RPQIAQLSEL GLVELTRKRQ GQNIYELFGR ACPSCGGLGH VAVLPGKDLL QPLATATGLV
RSAASARAEV VAPGENGGNG RRRRGGRGRG SQDAVLPLET SDTAAPEVST QEAQEPATAR
RQDPEMVAVP MTDEQQQLFG WLGLNPALLL EEPPASDNVV VRVVRPGEDE QEVLEAARQQ
LAASSGRRRR RGGRGGRSGS RNGASQPTSN SSSETPVVVT SSAPDEAAPL MVEITPLEAV
TNLTITEPEP APISEPAEPE PVAVVEPAEP EEPRRRRRRS SAVATV
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