Gene Syncc9605_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0249 
Symbol 
ID3736177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp257386 
End bp258993 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content64% 
IMG OID637774830 
Productintegral membrane protein MviN 
Protein accessionYP_380580 
Protein GI78211801 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTT CACTGAAGGG GATCGCACTG GTGGTGACCC TCGGCACCCT GCTGAGCAAG 
GTGGGTGGCC TGATTCGGCA GCTGGTGATC GCAGCGGCCT TCGGGGTGGG CGCGGCTTAT
GACGCCTACA ACTACGCCTA TGTGCTGCCT GGATTTCTGC TGATCCTGCT GGGAGGGATC
AATGGCCCCT TCCACAGCGC CATGGTGAGC GTGCTGAGCC GGCGCCCACG GGCCGAAGGA
GCCCATATCC TTGCGGCGCT CAACACCAGC GTCAGTGCTC TGTTGCTGAT GGTCACCATC
GTTCTGGTGC TGGCGGCGGA TCCTCTGATC ACCCTTGTGG GCCCTGGCCT TGCCCCCGAG
CTTCACGCCA TCGCACGGTT GCAGCTGCAG GTGATGGCGC CGATGGCGCT GCTGGCCGGA
CTGATCGGGT TGGGTTTTGG ATCCCTCAAC GCCGCCGATG AATTCTGGAT TCCGGCGATT
TCTCCGCTGA TGTCCAGCGG CGCCTTGATC ATCGGGGTTG GATTGCTCTG GTGGCAGCTC
GGTGCTGACA TCGCCTTGCC GTCTGCCGCC ATGGCCGGGG GTGTGGTGCT CGCCTTGGCC
ACGTTGGTGG GGGCTTTGCT GCAGTGGCTG ATCCAGCTGC CGGCGTTGAT CCGGCAGGGG
TTGGCCCGTT TTCAACTGGT CTGGGACTGG AGGCACCCGG GGGTGCGCGA GGTGTGGCGT
GTGATGGGGC CGGCGACGCT GTCGTCCGGG ATGCTGCAGA TCAATGTGTT CACCGATCTG
TTCTTCGCCT CCGGGATTCT CGGCGCGGCG GCGGGTCTGG GCTACGCCAA TTTGCTGGTG
CAAACGCCCC TGGGTTTGAT CTCGAATGCA CTGCTGGTGC CCCTGCTGCC CACCTTCGCC
AGGCTCACGG CGCCGGAAGA TCGTCCGCAG CTGATCGATC GGATCCGCCA GGGGTTGATG
CTGTCTGCGG CATCGATGAT TCCCCTGGGG GGGCTTTTCA TCGCCTTGGG TGGCCCCATC
GTCGCCCTGG TTTACGAGCG CGGTGCTTTC GATGCGTCAG CCGCCCAGTT GGTGACGGGT
TTGCTGATGG CCTACGGCCT GGGCATGCCG GCCTACCTAG GCCGGGATGT GCTGGTGCGT
GTCTTCTATG CCCTGGGGGA TGGGACGACG CCTTTTCGGC TCTCGCTGGC GGGGATTGGT
CTCAACGTGA TTTTTGACTG GCTGCTGGTT GGTGGTCCGA CCCCTTGGGG GAATCAGTCC
CCGTTCAATT TCGGTGCACC CGGGCTGGTG CTTGCCACGG TTGCCATCAA CCTGCTCACC
TGCTTCGCCC TGATGCTGGG TCTGCAGCAA CGCATTTCAG GACTGCCGCT ACGGCGTTGG
GGGATGGACC TTCTGAGGCT AGCCATCGCA GGCGTGCTGG CAGCGGGGGG CGCCGGGATC
ATCGTGACCT TTGTGTCCTG GCCCGCAGGG TTGCTGGGCC TGCTGTTTCA GGTGGGTGCC
CCTGGCTTGC TGGGTTTGGC GTTGTTTGCC TTAATCGGTG CACAGCTTCA GGTGCCGGAG
GTGCGTGAGA TCACGCAGTT GGTGATGGGC CGATTCAGGG CTCGCTGA
 
Protein sequence
MARSLKGIAL VVTLGTLLSK VGGLIRQLVI AAAFGVGAAY DAYNYAYVLP GFLLILLGGI 
NGPFHSAMVS VLSRRPRAEG AHILAALNTS VSALLLMVTI VLVLAADPLI TLVGPGLAPE
LHAIARLQLQ VMAPMALLAG LIGLGFGSLN AADEFWIPAI SPLMSSGALI IGVGLLWWQL
GADIALPSAA MAGGVVLALA TLVGALLQWL IQLPALIRQG LARFQLVWDW RHPGVREVWR
VMGPATLSSG MLQINVFTDL FFASGILGAA AGLGYANLLV QTPLGLISNA LLVPLLPTFA
RLTAPEDRPQ LIDRIRQGLM LSAASMIPLG GLFIALGGPI VALVYERGAF DASAAQLVTG
LLMAYGLGMP AYLGRDVLVR VFYALGDGTT PFRLSLAGIG LNVIFDWLLV GGPTPWGNQS
PFNFGAPGLV LATVAINLLT CFALMLGLQQ RISGLPLRRW GMDLLRLAIA GVLAAGGAGI
IVTFVSWPAG LLGLLFQVGA PGLLGLALFA LIGAQLQVPE VREITQLVMG RFRAR