Gene Syncc9605_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0240 
Symbol 
ID3736168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp248459 
End bp249580 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content66% 
IMG OID637774821 
Producthistidine kinase 
Protein accessionYP_380571 
Protein GI78211792 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCA CCGATCGATT CTTCGATTTC ACCGATCAAC AGCTTGTTGA TCTAACCGCC 
AAAGAAGGCA TTCAGCATCT GGGGCTGTAC GTCAGTGCGC CACCCAATCA GCAAGGCCCG
CCCTTGTTGC TGATCCGGCA ATGGTCGGCC AATGAACGAT CGCTCCCCCC TGCCGACGCA
GACCCGAACC TGCGCCTGCC TCACGAGAGC CGGCGCTGGT ATCCCCTCCA GGATGCCGGC
CTAATCCTGG GAGCCCTGCG CGCGGACCTG GATCCCCAGC GGAGCTGGAC GCAGACCCTG
GACCAACGGA TGCGGCGCAG TGCCGCCGCC ATCAGCCACG CCCTGGGGCG TGACCTGGAA
TGCCTGCAAC TTCGCCAGGA ACTCAACCAA CAAAACGATC AGCTGCGCAC CCTCGTGCAT
CAGCTGCGCA ACCCACTGGC TGCCCTGCGC ACCTACGCCC AACTGCTGCT GCGGCGGCTC
GAAGCCGACA GCTCCCACCG TCCACTCGTG GAGGGAATGC TCTCGGAGCA ACGCCAACTC
GGCCAGTACA TCGACGTGCT CGAAGGCCTC GGGCAGCAAC GTCTTCCCCA ACAGGAACCC
CTTGGCCCCA CCCTGTTGCC CCCCGGCCCT GCCGAAGGTG AGGCAACCAT GCAAACCCTG
CTGATGCCTC TGCTGGAGCG GGCAGAAGCG ACGGCAAGCC TGCAGGGCCG CCCCTGGCGG
GGTCCCGACC TGTGGCCCCA GTGGATTGAT CAACCGTCCC AGGACGGAAC GATCGCGGAG
ATCGTCGCCA ACCTCCTTGA AAATGCCTTC CGTTACAGCC CAGCGGGCTG CAGCGTGGGG
CTGTGCCTGT TGCCCGACGG GCTCTGCGTC TGGGACAACG GGCCGCCGAT CCCCCTGGAG
GAGCGCGAGC TGATTTTCGA GCGAGGAGCA CGGGGGTCCA CCGGGCACGA CCGAGCGGGC
ACCGGCCTTG GCCTCGCTTT GGCACGCTCC CTGGCGGAGC AGCAGGGCCG CAAGCTCACG
CTCTGCGTGG AGCCTTCCAC GATCGCTCCG GATCTGCCCG CTCAGGGCAA CGCATTCGTG
CTCAGCTGGC CGGCAGAAGC AAAGCCAGAC CCAACAACGT GA
 
Protein sequence
MQLTDRFFDF TDQQLVDLTA KEGIQHLGLY VSAPPNQQGP PLLLIRQWSA NERSLPPADA 
DPNLRLPHES RRWYPLQDAG LILGALRADL DPQRSWTQTL DQRMRRSAAA ISHALGRDLE
CLQLRQELNQ QNDQLRTLVH QLRNPLAALR TYAQLLLRRL EADSSHRPLV EGMLSEQRQL
GQYIDVLEGL GQQRLPQQEP LGPTLLPPGP AEGEATMQTL LMPLLERAEA TASLQGRPWR
GPDLWPQWID QPSQDGTIAE IVANLLENAF RYSPAGCSVG LCLLPDGLCV WDNGPPIPLE
ERELIFERGA RGSTGHDRAG TGLGLALARS LAEQQGRKLT LCVEPSTIAP DLPAQGNAFV
LSWPAEAKPD PTT