Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0240 |
Symbol | |
ID | 3736168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 248459 |
End bp | 249580 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637774821 |
Product | histidine kinase |
Protein accession | YP_380571 |
Protein GI | 78211792 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTCA CCGATCGATT CTTCGATTTC ACCGATCAAC AGCTTGTTGA TCTAACCGCC AAAGAAGGCA TTCAGCATCT GGGGCTGTAC GTCAGTGCGC CACCCAATCA GCAAGGCCCG CCCTTGTTGC TGATCCGGCA ATGGTCGGCC AATGAACGAT CGCTCCCCCC TGCCGACGCA GACCCGAACC TGCGCCTGCC TCACGAGAGC CGGCGCTGGT ATCCCCTCCA GGATGCCGGC CTAATCCTGG GAGCCCTGCG CGCGGACCTG GATCCCCAGC GGAGCTGGAC GCAGACCCTG GACCAACGGA TGCGGCGCAG TGCCGCCGCC ATCAGCCACG CCCTGGGGCG TGACCTGGAA TGCCTGCAAC TTCGCCAGGA ACTCAACCAA CAAAACGATC AGCTGCGCAC CCTCGTGCAT CAGCTGCGCA ACCCACTGGC TGCCCTGCGC ACCTACGCCC AACTGCTGCT GCGGCGGCTC GAAGCCGACA GCTCCCACCG TCCACTCGTG GAGGGAATGC TCTCGGAGCA ACGCCAACTC GGCCAGTACA TCGACGTGCT CGAAGGCCTC GGGCAGCAAC GTCTTCCCCA ACAGGAACCC CTTGGCCCCA CCCTGTTGCC CCCCGGCCCT GCCGAAGGTG AGGCAACCAT GCAAACCCTG CTGATGCCTC TGCTGGAGCG GGCAGAAGCG ACGGCAAGCC TGCAGGGCCG CCCCTGGCGG GGTCCCGACC TGTGGCCCCA GTGGATTGAT CAACCGTCCC AGGACGGAAC GATCGCGGAG ATCGTCGCCA ACCTCCTTGA AAATGCCTTC CGTTACAGCC CAGCGGGCTG CAGCGTGGGG CTGTGCCTGT TGCCCGACGG GCTCTGCGTC TGGGACAACG GGCCGCCGAT CCCCCTGGAG GAGCGCGAGC TGATTTTCGA GCGAGGAGCA CGGGGGTCCA CCGGGCACGA CCGAGCGGGC ACCGGCCTTG GCCTCGCTTT GGCACGCTCC CTGGCGGAGC AGCAGGGCCG CAAGCTCACG CTCTGCGTGG AGCCTTCCAC GATCGCTCCG GATCTGCCCG CTCAGGGCAA CGCATTCGTG CTCAGCTGGC CGGCAGAAGC AAAGCCAGAC CCAACAACGT GA
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Protein sequence | MQLTDRFFDF TDQQLVDLTA KEGIQHLGLY VSAPPNQQGP PLLLIRQWSA NERSLPPADA DPNLRLPHES RRWYPLQDAG LILGALRADL DPQRSWTQTL DQRMRRSAAA ISHALGRDLE CLQLRQELNQ QNDQLRTLVH QLRNPLAALR TYAQLLLRRL EADSSHRPLV EGMLSEQRQL GQYIDVLEGL GQQRLPQQEP LGPTLLPPGP AEGEATMQTL LMPLLERAEA TASLQGRPWR GPDLWPQWID QPSQDGTIAE IVANLLENAF RYSPAGCSVG LCLLPDGLCV WDNGPPIPLE ERELIFERGA RGSTGHDRAG TGLGLALARS LAEQQGRKLT LCVEPSTIAP DLPAQGNAFV LSWPAEAKPD PTT
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