Gene Syncc9605_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0208 
Symbol 
ID3736155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp215025 
End bp215885 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content62% 
IMG OID637774788 
ProductABC transporter 
Protein accessionYP_380539 
Protein GI78211760 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.751363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGCA GCGTTCGTGA TGCCATCGTC GGATTCACGG TGATCGGCGG CATCATCGGA 
TTTGCTTCCA CGGCTCTGTG GCTGAGAGGC GTTCGATTGG GGGCTAGCCA CTGGACCCTG
ACCGCCCGGT TCGATGATGC GGCGGGTCTG GCGGAGCGCT CCCCCGTCAC CTATCGGGGC
ATCCTCATTG GTGCGGTGCG CTCGATTGAG GTCACCCCTG AGGCTGTGGT GGCTGAGCTT
GAGATCAACA AAGGGGATCT GCGCCTGTCT CGTCCCGTGA CAGTCACGGT GGGGGCGGGC
TCGCTGCTGG GGGGTGACGC CCAGGTGGCC CTGGTCAGCA GTGGTGAGCC ACTGCCCCAG
GACGCACCCC TCCCCCGAGG GGTTGATTGT CAGCCAACGC GCCAGCTCTG CAACGGGGGA
ACTGTGGTGG GACGAGAAGC CCCCAGTCTC TCCACCGTTA CGGCAACCAT GCAAGAGCTG
CTGGCACAGG TTCAGGACGA ACGGGTGATT CCCAATGTGG CGGCCTCGCT TGAGCAGATG
GAGGCCACCA CAAAGGAATT CGAGGCGCTG ACGGTGCAGC TGCTGAATGA ACTGGCCAAG
GCCGCTCCTG TGATTCGCAA TCTCGAGTCG GCAACGGCTC ATGTGAACAA CATCGCTGCC
TCGCTCGACA ATCCCCAGAC GGTGAGTGAG TTCAAGCAGA CGGCCGCCAA TGCAGCTCAG
CTCACCGCCA AGATTGATGC TGTGGGTGGC GATGTGGCTC AACTCACCGG CGATCCTGAG
TTCATGAAGG GCGTGCGCAA TCTCACCATC GGCTTGGGTG AATTGTTCAG CGAAATCTAC
CCGGCACAAA CCGCCCAATA G
 
Protein sequence
MRRSVRDAIV GFTVIGGIIG FASTALWLRG VRLGASHWTL TARFDDAAGL AERSPVTYRG 
ILIGAVRSIE VTPEAVVAEL EINKGDLRLS RPVTVTVGAG SLLGGDAQVA LVSSGEPLPQ
DAPLPRGVDC QPTRQLCNGG TVVGREAPSL STVTATMQEL LAQVQDERVI PNVAASLEQM
EATTKEFEAL TVQLLNELAK AAPVIRNLES ATAHVNNIAA SLDNPQTVSE FKQTAANAAQ
LTAKIDAVGG DVAQLTGDPE FMKGVRNLTI GLGELFSEIY PAQTAQ