| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0185 |
|---|
| Symbol | |
|---|
| ID | 3736265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 192129 |
|---|
| End bp | 193553 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637774765 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_380516 |
|---|
| Protein GI | 78211737 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5305] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0234862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA GCTGGATCGT GGTGGTGGCT GCCGTCTGTC TGGCCTTTGG TTTGCGGGCT
TTGGTGTTGA TCGATGCCAC GGCGCTTTGG AGCGATGAGC TCTACAGCGT CGGCAAGAGT
TTTCAGCCCA GTTTCAGCCA CCTTTTGGCC ATGCTGCGGG AGGACACCCA TCCCCCGGCC
TATTACGGCT TGCTCTGGCT CTGGGGGCAT CTGGTCGGTC AGAGCCCAGT CAGCCTGCGC
TTCCTGTCCT GGTTGGCTTA TCTGGCGGGT GGCCTGGTCA TGGTCCGTCA GGCGATGGCC
CTTGGCCATG CCGGCACTCG GGCCAGGGTG GGAGCGGTCG CAGCGCTCTT GGCCTTTTGC
AGTCCTTATC CGGTTCGGTT CGCGATCGAG GGCAAGAGCT ATGCCGTGCT GGTGCTGCTG
GTGGCTCTGG CCTGGTGGTG GCGCCGTTCC GCCCATCCCG TCGCTTACGG GGCGGTGGCC
GGGCTGGCCG GACTGACCCA CTTCTATGGG TTGTTTCTGG TGCTGGCGGC CGCGGCATGG
GATGGCTGGC GACGCCGCTG GAGCTTTTTT ACCGCCGCCT TGATCGGAGT CATCCCGGCC
TTGGCCTGGA TGACTTATGC CGCGGACTAT CTCTTCAGCT CCCGGGCCGG CAGTTGGATC
GGTGTGCCGG ATTACGCCTT AGTGGAGGAA ACCTTGGCTC GCGGCCTTGG TCTCTGGCCG
TTGCCCAAAT TGGCTCTGAT CCTGCTGTTG CTGGTGGTGT TGCGGCGTTG GGGAGGGCTG
CGTCGGGTGC CGTGGCCGGC TTGGAATCTT CTCGATCGAA GCGGTCTGAT CCCGTCCCTG
CTGATGGTTC TTGGGGTGGT TGTCGTGTCG TTTGTGAAGC CGATGGCCTT CAGCCGCTAC
TTCGTCGTGT TGCTGCCGGC GGTGGTGCCC GTTCTGGCCG TGCAGATCGG TGCTTTTGAG
CTGAACCGCT TCGGCCGCGG CTGCGGTCTG ATCATCCCGG TGCTGCTGGT GGTCAGCTGG
TGGGGGCCAG GGTTCAGCGA GCTCGATGCA GGCGCCGGTG GTGTTCGGGA ACAGGACCAG
TTTCGTCTGA TCAGCCAGCG GACCATGGGA CTTGAGGATC GCTACAGCCC CAGGCCGCGA
CTGTTCAACC TCAGTGATCG GATGGAGGCG GCAATGGGCC GGATTCCCTT GCCTTCATCC
CCATGGGGGG GGAAGGGGGA TCTAAAGCAA CGGCTGCAGG GGCCGGATCT GCCCAGGCAG
CTCTGGCTGG CCAGCAGTGG GCCGCCGCCC GCCATGGAGC GCAAGCTCAA ACCCCTGCAA
TCACGGGTTG AGAAGGTGGG GTATCGCTGT GACCCACAGG CCACCGACCT CACCCATGCC
CGGTTGTTGC ATTGCCGATC CGAAGCCATG GGCCCTTCTG AGTGA
|
|---|
| Protein sequence | MKRSWIVVVA AVCLAFGLRA LVLIDATALW SDELYSVGKS FQPSFSHLLA MLREDTHPPA
YYGLLWLWGH LVGQSPVSLR FLSWLAYLAG GLVMVRQAMA LGHAGTRARV GAVAALLAFC
SPYPVRFAIE GKSYAVLVLL VALAWWWRRS AHPVAYGAVA GLAGLTHFYG LFLVLAAAAW
DGWRRRWSFF TAALIGVIPA LAWMTYAADY LFSSRAGSWI GVPDYALVEE TLARGLGLWP
LPKLALILLL LVVLRRWGGL RRVPWPAWNL LDRSGLIPSL LMVLGVVVVS FVKPMAFSRY
FVVLLPAVVP VLAVQIGAFE LNRFGRGCGL IIPVLLVVSW WGPGFSELDA GAGGVREQDQ
FRLISQRTMG LEDRYSPRPR LFNLSDRMEA AMGRIPLPSS PWGGKGDLKQ RLQGPDLPRQ
LWLASSGPPP AMERKLKPLQ SRVEKVGYRC DPQATDLTHA RLLHCRSEAM GPSE
|
|---|
| |