Gene Syncc9605_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0153 
Symbol 
ID3735762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp155990 
End bp157366 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content59% 
IMG OID637774733 
ProductCPA2 family Na+/H+ antiporter 
Protein accessionYP_380484 
Protein GI78211705 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.430918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.17839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGC CCACCCTGCT GAGCGAAATC AGCAGCCATG ACTTCGAGGT TGCCGAAACG 
TTGATCGGTG TTCTCAGGTT CGTGCTGATC TTCATCGCAG CCCGGACCCT GGCTGAAATC
CTTGTTCGGT TCGAACTGCC GACAATTCTT GGTGAGCTGC TAGCCGGCGT CATCATTGGC
GCTTCCGGGT TGCATCTGCT GGTGCCACCG GAAACCCAGG TGCAACTGAG TGGTGCCTTC
TCCAACGTCC TGGGAGGGCT GGCTCATGTT CCCCCGGAGG AAATTGGGCT GATTTACAAC
GAAAGCTTCG GTTCGCTTCG ATCTGTTTCC AACCTCGGCC TCTATTCCCT GCTCTTCCTT
ACCGGTCTGG AGAGCGAGCT CGATGAGTTG ATGGCTGTCG GCGCCCAGGC CTTCTCGGTT
GCTGTGGTGG GGGTTGTACT TCCGTTCGCC CTCGGAACCT TCGGCCTGAT GGCTCTGTTC
CATGTGGATC CAATTCAGGC CATCTTTGCT GGCGCTTCGA TGACGGCCAC CAGCATCGGT
ATTACCGCCA GCGTGTTTGG TGAGCTGGGT TATCTGCGCA CCCGTGAGGG CCAGATCGTG
ATCGGCGCCG CTGTCCTCGA CGACATCCTT GGCATCGTGA TCCTGGCGGT GGTCGTCTCC
CTAGCGGCAG GTGGCAGCCT TGAAATCGCT CCAATTGTTC AGCTCGTGGT GGCTGCCGTG
CTGTTTGTGG TGGTTGCTCT TGTGCTGAGC CGCAAAGCAG CTCCAGCCTT CGACTGGATG
ATCGACCAGC TCAAAGCGCC GGGCGCAAAG CTTGTCGGCT CCTACCTGTT ACTGGGAGCC
AGCTGCTTCA TCGCCACGGC GATCGGTCTT GAGGCTGCCT TGGGTGCCTT CGCAGCTGGT
CTGATCGCCA GCACTTCAAG GCATCGCCAT GAAATTCAGG CAGCTGTCAT GCCGATCGTC
GGCTTGTTCG CAACGGTGTT CTTCGTGCTT GTGGGCGCCG GCATGGATCT TTCGGTGATC
AACCCGTCCG ATCCTGAAGC TCGTTCAGCG CTGGTGATCG CTGGCTTCAT GTTCATTGTG
GCCATCATCG GCAAAGTGGT CGCTGGCTGG GCCGTGTTCG GCAAGCAGAA AACCAACCAC
CTGGTGGTGG GGCTTGGCAT GCTGCCCCGT GGAGAGGTGG GCCTGATCTT TTTGGGCCTT
GGGACTGCTG CCAAGTTGCT CAGCCCAGGC CTGGAAGCGG CGATTCTGCT GATGGTGATC
GGCACCACGT TCCTGGCACC GGTTTTGCTG CGCTTGGTGT TGAAGGGCAA GCCGCCTGAG
GATGGCGATC AAGTGCCTGA GGAATTGGCA GCCGATCCTC TGGCGGGTGC CTCCTGA
 
Protein sequence
MLLPTLLSEI SSHDFEVAET LIGVLRFVLI FIAARTLAEI LVRFELPTIL GELLAGVIIG 
ASGLHLLVPP ETQVQLSGAF SNVLGGLAHV PPEEIGLIYN ESFGSLRSVS NLGLYSLLFL
TGLESELDEL MAVGAQAFSV AVVGVVLPFA LGTFGLMALF HVDPIQAIFA GASMTATSIG
ITASVFGELG YLRTREGQIV IGAAVLDDIL GIVILAVVVS LAAGGSLEIA PIVQLVVAAV
LFVVVALVLS RKAAPAFDWM IDQLKAPGAK LVGSYLLLGA SCFIATAIGL EAALGAFAAG
LIASTSRHRH EIQAAVMPIV GLFATVFFVL VGAGMDLSVI NPSDPEARSA LVIAGFMFIV
AIIGKVVAGW AVFGKQKTNH LVVGLGMLPR GEVGLIFLGL GTAAKLLSPG LEAAILLMVI
GTTFLAPVLL RLVLKGKPPE DGDQVPEELA ADPLAGAS