Gene Syncc9605_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0144 
Symbol 
ID3737329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp142965 
End bp143828 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content38% 
IMG OID637774723 
Productputative sugar nucleotide epimerase/dehydratase 
Protein accessionYP_380475 
Protein GI78211696 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.120454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0125946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAGAAA TTTTTCAACA GCATAAATTT GATATTGTTT ATCATTTGGC AGCAGAGACA 
GGAACAGGAC AGTCATTTGA CGAACCATCT AGATACGTTG ATGTAAATGT ACGTGGTACT
ACAAATCTTT TTGAGGCTCT AAGAGCTAGT GGTCATACTT CTGGAAAGAT TATTCTTTCA
GGCAGCCGGG CTATCTATGG TGAGGGACTT TATATCAATT CTCTTGGTGA ACCCAAGAAA
GCAAAGTCTA GGTCGTCAGA ATGTATGAAA AGAGGTGACT TTAAAGTTTA TGGCGAGTGT
GGAACTTTAT TGCAAGCTAA AGCAACACCG GAAAATTTCT TTCCTAAACC AGATTCTGTT
TATGCAAGCA CAAAACTCAT GCAAGAGCTT CTACTTAAAA ACCTGTGTTC CAATATGGAT
TGGAATATTC TACGCTTTCA GAATGTTTAC GGCCCTGGGC AGTCGTTAAA CAACCCCTAC
ACCGGTGTAC TATCTATATT TTGTTCTCAG ATTAAGGATG GAAAAACCCT GGAAATATAT
GAAGATGGTG AAATTTTTCG TGACTTTATT TATATCGATG ACGTAGTTAG ATCATTGGTT
GCTGCCATAA ATGCATCATC TGGCGAAATT ATTAACATAG GCTCAGGTAT TTCCACCTCA
ATCATTGATA TCGTGAATAT ATTGTGTCGG CTAGCTGAGG AAAAAGGATT CCACCCAGAA
TACAAAATTA CCGGTAAATT CAGAGATGGT GATATTAGAT TTGCCCAAGC TGATATAACA
AAAGCATTTC AAAGTTTAAA CAGCTGGGAG CCGAAAATAC CTCTTGAGGT GGGATTGAGA
AATCTTGTTG ATTGGAGTCT TTAA
 
Protein sequence
MIEIFQQHKF DIVYHLAAET GTGQSFDEPS RYVDVNVRGT TNLFEALRAS GHTSGKIILS 
GSRAIYGEGL YINSLGEPKK AKSRSSECMK RGDFKVYGEC GTLLQAKATP ENFFPKPDSV
YASTKLMQEL LLKNLCSNMD WNILRFQNVY GPGQSLNNPY TGVLSIFCSQ IKDGKTLEIY
EDGEIFRDFI YIDDVVRSLV AAINASSGEI INIGSGISTS IIDIVNILCR LAEEKGFHPE
YKITGKFRDG DIRFAQADIT KAFQSLNSWE PKIPLEVGLR NLVDWSL