Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0144 |
Symbol | |
ID | 3737329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 142965 |
End bp | 143828 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637774723 |
Product | putative sugar nucleotide epimerase/dehydratase |
Protein accession | YP_380475 |
Protein GI | 78211696 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.120454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0125946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATAGAAA TTTTTCAACA GCATAAATTT GATATTGTTT ATCATTTGGC AGCAGAGACA GGAACAGGAC AGTCATTTGA CGAACCATCT AGATACGTTG ATGTAAATGT ACGTGGTACT ACAAATCTTT TTGAGGCTCT AAGAGCTAGT GGTCATACTT CTGGAAAGAT TATTCTTTCA GGCAGCCGGG CTATCTATGG TGAGGGACTT TATATCAATT CTCTTGGTGA ACCCAAGAAA GCAAAGTCTA GGTCGTCAGA ATGTATGAAA AGAGGTGACT TTAAAGTTTA TGGCGAGTGT GGAACTTTAT TGCAAGCTAA AGCAACACCG GAAAATTTCT TTCCTAAACC AGATTCTGTT TATGCAAGCA CAAAACTCAT GCAAGAGCTT CTACTTAAAA ACCTGTGTTC CAATATGGAT TGGAATATTC TACGCTTTCA GAATGTTTAC GGCCCTGGGC AGTCGTTAAA CAACCCCTAC ACCGGTGTAC TATCTATATT TTGTTCTCAG ATTAAGGATG GAAAAACCCT GGAAATATAT GAAGATGGTG AAATTTTTCG TGACTTTATT TATATCGATG ACGTAGTTAG ATCATTGGTT GCTGCCATAA ATGCATCATC TGGCGAAATT ATTAACATAG GCTCAGGTAT TTCCACCTCA ATCATTGATA TCGTGAATAT ATTGTGTCGG CTAGCTGAGG AAAAAGGATT CCACCCAGAA TACAAAATTA CCGGTAAATT CAGAGATGGT GATATTAGAT TTGCCCAAGC TGATATAACA AAAGCATTTC AAAGTTTAAA CAGCTGGGAG CCGAAAATAC CTCTTGAGGT GGGATTGAGA AATCTTGTTG ATTGGAGTCT TTAA
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Protein sequence | MIEIFQQHKF DIVYHLAAET GTGQSFDEPS RYVDVNVRGT TNLFEALRAS GHTSGKIILS GSRAIYGEGL YINSLGEPKK AKSRSSECMK RGDFKVYGEC GTLLQAKATP ENFFPKPDSV YASTKLMQEL LLKNLCSNMD WNILRFQNVY GPGQSLNNPY TGVLSIFCSQ IKDGKTLEIY EDGEIFRDFI YIDDVVRSLV AAINASSGEI INIGSGISTS IIDIVNILCR LAEEKGFHPE YKITGKFRDG DIRFAQADIT KAFQSLNSWE PKIPLEVGLR NLVDWSL
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