| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_2001 |
|---|
| Symbol | |
|---|
| ID | 3747111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2537276 |
|---|
| End bp | 2538286 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637774538 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_380292 |
|---|
| Protein GI | 78189954 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0796567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTT TCAAATCAAT TTCGCGCACT CTGTTTGCAC TTTCTGTGTT TACGGCAACT
CCCCTTTTTG CTGAAACAGC AACGTCGCAA CCATCCACCC AACAAGAGCC ATTAAATATT
AGCGGTACGC TTGAGGTTGA GGGATATGGT GAGCGTGTTG CGGGTAAAAC AACTTCTGAG
TTTGTACTTG CTACTTTTGA AACTCGCCTT GAACGCCAGC TCTCCAAACA TGTGTTCGCT
CATGCAACGC TATTGTTTGA AGAAGATGGT GATAATGAAT TGTTGGTGGA TGAGGCTTTT
ATAACCTACA AAGCACTCAA TTCGCCTTGG TATGTAAAAG CTGGACGCTT TACGCAACCC
TTTGGCTGGT TTGAAAGTGG AATGATTTCT GATCCCTTAA CGCTTGAGTT AGGCGAAACC
AAACATCATG CCGCATTGCT TTTAGGGACA GAGAGTGAGC AATTAAGCGC CGCGCTCGGC
ATGTTTCGTG GCGATGTTCA ATATGATAAC AACCCTTCCA TTGACAGCTT TGTTGCGGCA
GTAGCAACTA ACTTTACGCT TGGCAAAGAG ATGCGTGGAA CGCTTGGTGC TTCATTTACC
AACAATATGG GCGACACCGA TGGCTTGCAG GATCTGTTTG ACGATGGTGC TGGTAACTTA
GTTGGAACCG AAAAGGTGAG CGGTTATAGC TTTTATGGTT CGCTGGCGCA AGGAGCATTG
ACGTTGCGAG CAGAGTATGT TGCTGCGGCA AATTCGTTTG TTGATGGCAC ATTAGCAGGA
TTGAAGCCTT CAGCAAGTAA CGTTGAAGTG AGCTATGCGG TGCGCGAGGG GGTTGATGTT
ACGGCGCGTT ATGGCAGTGG TTCCGATATG GATATTGCAA ACCAATATGG TGCGGCTTTG
GCTTGTACGG TAGATGGTGC TGCAACGTTA GGAGTTGAAT ATCTCCATAA CAGCATGGAT
AGTGCGGCTG ATGCTAACCG TCTAACGGTG CAGCTTGCCG TAGAGTTTTA A
|
|---|
| Protein sequence | MNSFKSISRT LFALSVFTAT PLFAETATSQ PSTQQEPLNI SGTLEVEGYG ERVAGKTTSE
FVLATFETRL ERQLSKHVFA HATLLFEEDG DNELLVDEAF ITYKALNSPW YVKAGRFTQP
FGWFESGMIS DPLTLELGET KHHAALLLGT ESEQLSAALG MFRGDVQYDN NPSIDSFVAA
VATNFTLGKE MRGTLGASFT NNMGDTDGLQ DLFDDGAGNL VGTEKVSGYS FYGSLAQGAL
TLRAEYVAAA NSFVDGTLAG LKPSASNVEV SYAVREGVDV TARYGSGSDM DIANQYGAAL
ACTVDGAATL GVEYLHNSMD SAADANRLTV QLAVEF
|
|---|
| |