Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1963 |
Symbol | |
ID | 3747825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2490416 |
End bp | 2491333 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637774499 |
Product | hypothetical protein |
Protein accession | YP_380254 |
Protein GI | 78189916 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0378634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTTA TGGCGCTTTT ACTACTTGCC TTTTCTTTAC CTGCTTTTGC GGCTGATGCT GCACCTCTTG CGGTGCAAAG CGATTGGTGG ATTTGGGTGT TAGGCTTATT TACCTTTTCA TTTTTTCTTG GCATTATTGC CGTTATTGCG GGCGTTGGTG GTGGGGTGCT TTTTGTGCCA ATTGTGAGCA GTTTTTTTCC CTTCCATATT GATTTTGTAC GAGGTGCAGG CTTACTTGTA GCTCTTGCAG GCGCACTTTC AGCGGGCGCT CCTCTTTTAC GAAAAGGTCT TGCTAACTTA AAGCTTGCGC TCTCTATGGC GCTTATTGGC TCCATTAGCT CCATTGCTGG TGCTATGGTT GGTTTAGCCC TCCCTGAAAA CATTGTGCAG CTTTCGCTTG GCGCTACTAT TCTTTTTATT TCGGTGATTA TGTTGCTCTC CAAAAATTCA GCATATCCCG ACATTTCTAA GCCCGATAGC CTTTCACAAG CGCTCCATAT CCACGGTATT TACTACGATG AACAGCTTAA AAAGGATGTG AGTTGGCAAA TTCATCGTAC CCCTATCGGT CTTTTGCTCT TTATCGTGAT TGGCTTTATG GCTGGTATGT TTGGGCTTGG TGCTGGTTGG GCAAACGTCC CTGTTTTTAA CTTAGTGCTT GGTGCTCCAC TGCGCGTCTC GGTTGCAACC AGCGTTTTTG TGCTTTCCAT TAACGATACG GCTGCGGCTT GGGTTTATTT ACATCAAGGC GCTGTGCTTT CGCTCATTGC TGTGCCTTCA GTTGCAGGCA TGATGCTTGG CACTAAAATT GGCGCAAAGC TACTCACGAA AGTGCATACA AGTGTGGTGC GCTGGATTGT TATTGCACTG CTTGCTGGTG CAGGATTAAA GGCATTTTTA AAGGGACTTG GTATTTAA
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Protein sequence | MPLMALLLLA FSLPAFAADA APLAVQSDWW IWVLGLFTFS FFLGIIAVIA GVGGGVLFVP IVSSFFPFHI DFVRGAGLLV ALAGALSAGA PLLRKGLANL KLALSMALIG SISSIAGAMV GLALPENIVQ LSLGATILFI SVIMLLSKNS AYPDISKPDS LSQALHIHGI YYDEQLKKDV SWQIHRTPIG LLLFIVIGFM AGMFGLGAGW ANVPVFNLVL GAPLRVSVAT SVFVLSINDT AAAWVYLHQG AVLSLIAVPS VAGMMLGTKI GAKLLTKVHT SVVRWIVIAL LAGAGLKAFL KGLGI
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