Gene Cag_1911 details

Gene Information

• Locus tag: Cag_1911
• ID: 3747656
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 2430964
• End bp: 2431581
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637774448
• Product: OmpA domain-containing protein
• Protein accession: YP_380204
• Protein GI: 78189866
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
• TIGRFAM ID: [TIGR02802] peptidoglycan-associated lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACAA GAAAATATGC GTTTGCCGCT TTTGCTCTTC TTGCATTAGC AGGCTGTTCA 
TCAAAAAGTA GTGTAGCACC AGCTCCTTCC GCCTCAAGCT CAGCGCCACA AGCCTTAGCT 
ACACCATTGG CAGAACCTGT TGTGCCACCA CCAGCAATTG CCTCTGAGCC GCTGCCCATG 
TACACGCCCC CTGTAACATC GCAACCACTT ACTCCGTCCG CCACCACAAC AACGCTTGTG 
CCTGCTACGG TAAAGGGGTA TGGATACGAT CAATGGCAAA AAGGACCGCT TGGCGATATC 
TTTTTTGAAT ACGATAGCGC CACGCTTGAT GAATCTGCCC AAATGCAATT ACAGCAAAAT 
GCGGCACTCC TTCAGCAATT CATTGTTGAA AGCATACAAA TTGAAGGGCA TTGCGATATT 
CGCGGCACTT CCGAATACAA CCTTGCGCTT GGTGAACGCC GTGCTACCAC CGCAAAAGAG 
TACCTTATGC GGCTTGGAGT GCCAGCCTCC CGCCTTGAAA CCGTGAGCTT TGGTGAAGAG 
CGCCCCTTTG ATAATGGCAA TAGCGAAGAT GCTTGGGCAA AAAATCGCCG AGTGCACTTT 
GTGCTCATCA AGCAGTAA 

 

Protein sequence

MKTRKYAFAA FALLALAGCS SKSSVAPAPS ASSSAPQALA TPLAEPVVPP PAIASEPLPM 
YTPPVTSQPL TPSATTTTLV PATVKGYGYD QWQKGPLGDI FFEYDSATLD ESAQMQLQQN 
AALLQQFIVE SIQIEGHCDI RGTSEYNLAL GERRATTAKE YLMRLGVPAS RLETVSFGEE 
RPFDNGNSED AWAKNRRVHF VLIKQ