| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1875 |
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| Symbol | |
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| ID | 3747027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2382485 |
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| End bp | 2384926 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637774412 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_380168 |
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| Protein GI | 78189830 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTC AGTTTGTAAA ACATAACCCC GCTTTTCTTG ATGCTGGGCA CTTTCTTGAG
CAAGTGGTGG CGCGCCGTGC CGATGTAGCG CATTTGCTTG GGCATCTCGG TAGTTGTGAA
CCTATAGGTA CGGTTCGTCA TCTTTTTATT ACCGGTCAAC GTGGCAGCGG CAAAACATTT
GTGGTGCGCC GTGTTGCTTT AGCGGTTGAG CAACATAACG CTTTACGTAG CCGCTACTAT
CCGCTCTTTT TTTCTGAGGA GAGCTACTCT GTTAGTTCAT CAGCCGAATT TTGGCTTGAA
GCTTTATTTC ATCTTGCTCG CCAAACCGCT AATGAGCAGT TTGCCCAAAC CTATCAAGCC
TTGCGCGAAG AGGTTGATGA AGAGCGTATT CGCCAAATTG TGCTGCCGTT GTTGCTTGAT
TTTGCAGATA ATCAAGGTAA AACGCTCCTT TTGATTATTG AAAACTTCTC CATGTTGCTT
GCCGATATGG CAAGCAGTCG CGAAGGTGAA GTGCTTGCGC AAACGCTGTT GCAGGAGCCT
CGTTTTCAAC TCTTAGCTAC GGGAACTTTT ACTTTTGACA GCTTGGAGGT GCCTTTTGGT
AAATACTTTA GTAGCATAAC CCATCACGCG CTTGAGCCGC TCAGCAATGC TGATTGTAAT
GCCTTGTGGC AGCTTTATAG CGGTACGCCT TTAGCCGATG GGCAAATTAG AGCAATGAAC
ATTTTAGCGG GTGGAAATGC TCGTTTGTTG GTAACGCTTG CGCGTGTAGC TAACGGGCGA
ACCTTTAGCC AACTGCCTGA AATTTTGGCG CTTGCTCTTG ATGAGCATAC CGAGTATTGC
AAAAGCTATC TTGATGTGAT GGCGCCGGTT GAGCGCAAAG TCTATTTATC TATTGCGGAA
TTATGGGCAA TGGTTTCAGC GCGAGAAGTG TCATTAGCCG CACGTATTGA TATCAATAAA
ACCAGTGCCT ATCTCAACCG CTTAATTAAT CGAGGTGCTA TTAGCGTTGA GCGGCAGGCA
AAGCGCAATA AGCTGTATGG CGTAACCGAG CGTATTTATA GCATTTACTA TCTCATGCGC
CGCCATGGAT GGCAATCGGG GAGAGTGCGT GCGTTGCTTG ATTGTATGTT GGCATTTTAC
GATCCCGCCT CATTCCCAGA CCGCCTTTCC GATAGTGAGC GTGAGCGCTG CACCTCCGTT
GCTGAAGCAT TAACTATGTT GCCCGAGCGC GAGCATGTGG AGCAGTGCCA TCAAAATTTT
CTTGATGCAA AACGCCACTC CCGTTTTGTG CCATCTCTTG CCTATTTTGT TCGCTTTGTG
CAAAAGAGTG ATGTTTCTCA TGCTGATGAA TCATCTTCAC CGATGCTTGG TGAAAGCTTT
CGTCAAGCGT TTGAACTGCT TGAAACCGAA AGTTACACGG AAGCGCTCCC GATTTTTGAT
GCCATTATTA TGGTGTCGCG CCATAGCGAA AGCGAGCAAG CCATTGGGCA GCGTTATGGT
GCCATGATTG GGCGCGGCGT GGCGCTTGGC AATCTTGAGC GGTATGAGGA AGGATTTCGT
TTGCTTGATG AAGTGGCCGC AACCTGCCAA GAGCGTTCGG TGCGGCGCCG CTTAAAGTGG
GGATTGCTTG CATTGTTGGG CAAAGCAAGT GTACTTGAGC GAGCAGGGCG CATTGATGAA
GCCGTAACGT TGTACGATGA ATTGGTAAGC CGTTATCGCC GTCAGCAAGA ATTGGAATGC
TCCACCTTAG TGGCGGCAGC GCTTTTGCAC AAGTCGCTCT TAGTAAGCAA AAGTAAAGGT
GGAGAAGAAG AGATTGCCAT GTGCGACACC TTGCTTGAAT TGTATAGCGA GCGCGTCGAG
TTACCGTTAG TTGAGTTAGT GTGTGCAGCA TGGCGGAACA AAGCAATTGC GTTTGAAGCG
CTTAATCGTA ATGATGACGC ATTGCTTGCT TATGGAAAAC TGTTAGCGCT ATGCCGTCAG
CGAAGTGAAC CACATATGAT GCAGCACACG GCTCATGCGT TACAGAATAT GGGCGTTGTG
TATGGTAAAA TGCACCGTTA TAGTGATGCC GAGCACTGCT TTATGGAGGT GCAGAGCCTT
GCGCCGCAGC AAGCTCGTGC GCATCTTATG CTTTTAAAGT TGTTAGTAAA AATGGAGGAG
CAGCAGCACG CCGTGCTTTC GGAATTGCGC AACTACCTTG CTGCTACAAG TCTTGCCTTA
CGGGCGCTGC CTCAAACCAT TGAATTATTT ATTACCTGTG CTGTTGCAGG ATATGCGGCT
GAAGCATTAG AGTTGCTGGT GGCATCGCCT CTTGCGGTTT CACTGGAGCC TGTGCAAGCG
GCATTGCAAC ACGCTACGGG TGATGAAGTG CGAAGTGCTC CCACGATCGT AGAGGTTGCT
AACGATATTG TGGCAGCAAT TGAGGCGCGT CGTAACGCAT GA
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| Protein sequence | MSIQFVKHNP AFLDAGHFLE QVVARRADVA HLLGHLGSCE PIGTVRHLFI TGQRGSGKTF
VVRRVALAVE QHNALRSRYY PLFFSEESYS VSSSAEFWLE ALFHLARQTA NEQFAQTYQA
LREEVDEERI RQIVLPLLLD FADNQGKTLL LIIENFSMLL ADMASSREGE VLAQTLLQEP
RFQLLATGTF TFDSLEVPFG KYFSSITHHA LEPLSNADCN ALWQLYSGTP LADGQIRAMN
ILAGGNARLL VTLARVANGR TFSQLPEILA LALDEHTEYC KSYLDVMAPV ERKVYLSIAE
LWAMVSAREV SLAARIDINK TSAYLNRLIN RGAISVERQA KRNKLYGVTE RIYSIYYLMR
RHGWQSGRVR ALLDCMLAFY DPASFPDRLS DSERERCTSV AEALTMLPER EHVEQCHQNF
LDAKRHSRFV PSLAYFVRFV QKSDVSHADE SSSPMLGESF RQAFELLETE SYTEALPIFD
AIIMVSRHSE SEQAIGQRYG AMIGRGVALG NLERYEEGFR LLDEVAATCQ ERSVRRRLKW
GLLALLGKAS VLERAGRIDE AVTLYDELVS RYRRQQELEC STLVAAALLH KSLLVSKSKG
GEEEIAMCDT LLELYSERVE LPLVELVCAA WRNKAIAFEA LNRNDDALLA YGKLLALCRQ
RSEPHMMQHT AHALQNMGVV YGKMHRYSDA EHCFMEVQSL APQQARAHLM LLKLLVKMEE
QQHAVLSELR NYLAATSLAL RALPQTIELF ITCAVAGYAA EALELLVASP LAVSLEPVQA
ALQHATGDEV RSAPTIVEVA NDIVAAIEAR RNA
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