Gene Cag_1832 details

Gene Information

• Locus tag: Cag_1832
• Symbol: rplO
• ID: 3746463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 2350647
• End bp: 2351201
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637774370
• Product: 50S ribosomal protein L15
• Protein accession: YP_380126
• Protein GI: 78189788
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.281324
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTAA GCTCTCTTCG TCCCGCGAAA GGCTCTGTAC GAAATAAAAA GCGTGTTGGT 
CGTGGTCAGG GGTCAGGTAA TGGTACCACT GCTGGTAAAG GTAATAAAGG TCAACAGGCA 
CGCAGTGGTT ACAAGCGCCC TATTATTGAA GGTGGTCAAG TTCCCGTTTA TCGTCGTTTG 
CCTAAGTTTG GTTTTACCTC TCGTTCACGT AAAACTATTA CAACGATTAA TTTGCTTCAA 
ATAGAGCAAT GGTTAGAGCA AGGCGTTGTA AGCAATGAAC TTACTGTTCA AGATTTCAAA 
ACGTTGCTTC ACGCAAGCAA TACCGATTAC TTTAAAGTTC TTGGTGCTGG TGAAGTAACT 
CAGCCGATCA CCATTACAGC CCACTTTTTT AGCAAGAGCG CAGAAGAAAA AATAGCTGCT 
GCTGGCGGAA AAACGATTAT TGCGTTCCGT ACTCTTGCTG AAGCTGTAAA TATTAAAGGC 
TTACCTATAG AAGAGGCTCT TCTTAAAGAA AAAGTTAAGC TTGTTAAGGT GAAAAAGGCT 
AAGCCTACCG CCTAA 

 

Protein sequence

MNLSSLRPAK GSVRNKKRVG RGQGSGNGTT AGKGNKGQQA RSGYKRPIIE GGQVPVYRRL 
PKFGFTSRSR KTITTINLLQ IEQWLEQGVV SNELTVQDFK TLLHASNTDY FKVLGAGEVT 
QPITITAHFF SKSAEEKIAA AGGKTIIAFR TLAEAVNIKG LPIEEALLKE KVKLVKVKKA 
KPTA