| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1615 |
|---|
| Symbol | |
|---|
| ID | 3746479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2110253 |
|---|
| End bp | 2114875 |
|---|
| Gene Length | 4623 bp |
|---|
| Protein Length | 1540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637774154 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379911 |
|---|
| Protein GI | 78189573 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAAGTT TTAAGCACAT AAGCCTTAAA GCGTTAGCTG GGCTACTCTT ATCGGTGCTG
TTGGTGGCAC TGATGGCACT TGTGCTGCTT AATAGTGGCT CGGTGGATCG TGCGGCGCGT
GCGTTGGCAA TGCAGCTTTT TCAAAAGGAG CTGCATGGGC GTTTGGAGAT TGATGAGTTG
CATTTGACCT TTCCTAACCA TGTAACGCTG TTACATCCCC GTGTGTATGC GCCAAACGAG
CGTGAGCCTG TGGTTGAAGC GGCACGCATG ACGGCGCGTT TTCATTTTCT TGCATTACTG
CAACCCGATA TAAAAAAACT TGCTTTTCAA TCGTTGGAAG CGCAGCGTTT AAAAGTGCGT
CTTGTGCAAA ATGAACAAGG CAGCTTGAAC ATTGAGCGGG CTTTTGCGTC GCGTTATCCC
GATACAACCA AAACAGGCAT TGAGGAGTAT TTTTGCAAGC AACTCTCGCT GAAGCAAGCT
TCATTCTCTT ATTCTTTTAT AAAAGATGGA AAAGAAATTC CCCTTGCTCG TGCGAACAAC
ATCAACGCAC AACTCCGTTC GTTCACGGCA GGTAAAGCGT TAGTAAAGGG AGAGATACAG
GAGTTCCAAA GCAATATTGC AAGCCATGCG CTTGTGGTGC AGAAAATGCA GGGGCGATTT
TTCTTTTCTG ATAAGCGCTC TGAAGTGCTT GACTTGCAAA CAAGGATAGG CAATAGCCAC
GCTATCCTTT CAGCCACACT TGAAGGTGTG TCGCTCTTTA AGCCATCGCT TTTACAGCAA
GTAGCGCAAA GTAACGCCTT TGTTGCTATT GAAGAGATTG ATCTCCATAG CAACGATGTT
AAGCGACTAT TTCCCTCGCT GCCCTTGCTG GAGGGCATCT ATCAGGTAAA AGCAACTGCG
AAGCAGCAAA ATGGCACGCT TGAGCTACGT GAGGCGCAGC TTGTGTACCG TAAGAGCAAG
TTAGCGCTAC AAGGCACCAT TCAGCATCCA TTCGAGAGCA ACAAGTTGCA GTACAATCTC
CAATGCGATA GCTCAAAAGT AAGCTCGGAG CTTTTAACGG CGCTTATAAC CAATAAAGAG
GATCAGCAAC TTGTTACCTC TCTTAAATCT ATTGGCGACA TCACCTTAGC GGGTAAGCTG
TCAGGCAATC TTTCCGCCCT GCAAGCTGAC GTGCAAAGTC TTACAAACGT TGGGATGGTA
GGCTTTAAGG GTGCAATAGA ACGTCAGCCG AATAACTCAT TTGCAGCGCA TGGCAATGTG
GCGCTCAATG CTCTCAAACC GCACCTTATT TTAGGTATGG CTGATGTAAA AAGTCAGCTT
AATGCTACAG GCACTATGGA GCTTCTTGTG GAGCCTAACG CTTTGCCCGA AGTGGCGCTT
GCTCTGCAAC TGCAAAACTC CTTTTGGCAA CATCTCAACG TTACCAAAGG CACTCTTTCA
TTTCGCCATA AAAAGCAACT GTATGAAGGT GCGCTTTCCC TCTCAAATGG CAGCGAAAAT
CTTGCGGTGC AAGGCACGGT GAACTTGAAT AGTGCTCAAC CCACTTACGA CCTTACGGGT
ACAACCTATA AACTCAATGT TGGGCAACTT CTGCAAAGCA AAAATTTTTC TACCGATCTT
AATAGCCGCT TTACGCTGCA AGGCGAAGGT TTTGATTTAC GCCAACTTAA CCTGCAAAGC
AGCGTTGTGT GTGCGCCTTC GGTGATTAAT GACGTTGTGC TGCCAAACGG CACAGCGGCG
ACGCTTTCCA TTGCCCAGCA AGGCACAGCG TCGCGTGTAA AGGTAACAAG CGATTTTTTT
GATGTAACGG CTGAGGGGCA TTACACCTTT GAAGATTTAA CGGCGTTGGG GTGGATGGCG
CTTTCGGGCA TTTCGCATGA GGTGGCGCGG CTCAATATTT GGGGCGAAAC AGCTCAACTC
AATCCACCAG CCAACATGCT CACCCCGCAA CCGTTTACCG TTACCTACCA GCTTGCGTTG
CACAACATTG CTCCACTGCT CTCCATTATT GCGCCGCTTC AGCAGATTGC CATGCAGGGA
ACAGCTCAAG GGAAGGCTGA GCACAACGGT GGAGCTTACA CCATTGCAGG CACTATTGAC
CTGAATAATC TTATTGTAGA AGAGGAGTTC GCGGCAAAGC GTATCCATTT ACAGGGGAGC
TTACGGGGCA ATAGCAACGG TATTTTGGAA GCGCAAGGCA GGGGTGCAAT TGCGGCGTTA
CGGGTTGGTA AGCAAAAAGT AAGGAACACC AACGTAACGG CAGCATATGT GCCCACCACG
CTTACCAGCT CAATTGATGT TGATGTTGCG GATGTTGTGC AGCGCGTCAG CACAAGCTTT
GCTATGAAGC AGCAAGGCAG TGGTTATTTG CTTGATGTGC AACAATTGAA CGTGCAGGAT
CGCGAGGGTA GTTGGCAGGC AAACAACAAT TTGCCTATTG TGTTGGATAA AGAGGTGCTT
CGCTTTAACA ACTTTACCTT GATGCGTGGT GCGCAAAAAG CGGTGTTGCA AGGTGAACTA
AGCAACAACC GCGCCAGTGC TTTTACCTGC ACGTTGTCAT CGTTGCAGAT GAATGAGCTG
CAACACTTTA TGCTTAATGC TGGGCTTGAA AAACTACAAG GCATTGTAAG CGCTACGTTG
CACATAAGCG GTGTTCCGGG TGCTAAACAA AGCAGCATAA GTGTTCGGGC TGATAATGTT
GCTTATGATG ATTTAATGAT TGGCATTGTG CAGGGCAGCG CTCGCCATAG TAATAATTTG
CTCCATTTTG AACTACAAAG TGAAGCTCCC GCAATGGTTA ATGGCATTCA GAGTGCCCAA
CGTTCTAATG CTTTACTGAG TACCATTGAA GGTAGCGGCA CCATTCCCTT AGAGCTGAAA
TATTATCCCT TCAAGCTGCG TGTTAATGAG CAGCAAAACG TGCATGCTAC CTTCCGTTCC
GACAACTTAT CGGCACGCTT TCTTGAATAT TTGCTACCAT TTTTTAGTGC GGCTGAAGGC
ACCATTCCCA CCCTTTGCAC TATTGAGGGA AGTGCGGCAA AACCCCTTAT CTCACTGCAT
TCGCGTTTGC AGGATACGCG CATTACCGTG AAGCCAACGC ACGTTTCTTA CCGCCTTGAT
GGCGATATTT ATGCCACCCC GCAAGCGCTT GAGCTTCGCA ACATTACTCT TAGCGATAAC
AACAACGGCA AGGGCTCCAT TCGTGGTTTT GTTCACCTTG AAAAATTGCA ACCCTCTCGT
CTTGAATTAG CGGCAAGCTG CAATAACTTG CTTTTCTATA ATAAAAAAGA TCAGCAAGAC
GACACCTCAT TTGGCTCTAT TGTTGGCTCC ACGCGCAATT TTACCTTAAC GGGCAGCCTC
CGTTCACCAA TAGTTGAGGG GGAGGTGCAA ATTGATCGTG CTGATTATTC GCTTTATAGT
GCAGGGGCTA ACGAAAGCGC CCAATATGTG GGCATTGATA ACACCATCTC GTTTGTGGCG
CGCAATCCAA AACCAAAAGC TCCCAAAGCT AAAGAGCTAA AAAGCGGCGG TTCCAAAGAG
TTTTACTATT CGCTGATTGA TATTCTTACC ATTCACAATT TGCGCATTAG CTCGCCCATG
CCCCTGAAGT ACACCACAAT TTTTGATCGT ATTCGGGGTG AAGAGCTTGA AACCACGCTC
TCTAATTTGT CGTTAGTGGT GAACAAAAAT AGCCAGCGTT ACCGCATGTT TGGTTCCGTG
CAAGTAACAA GTGGTACCTA CCGTTTTTCC AACGCAAGCT TTGAGTTGCA GCCGGGCGGC
AGCATTACAT GGAATAATGT GGATATGCGT AGTGGCGTTC TGGAAAATCT TTATGGGCGC
AAGTACATTA ACGCCTTAAA TCCACAAAGC GGTGAGCGCG ACGATGTGCA TTTGCTGCTT
GCTATGACGG GCACGCTTAA TGAGCCGCAA GTTGCTATGG GCTATTATCT TAACGATCAA
ACGCAGCCTT ACGCTTCATC CACAACCATT GGTACCGAAA CCAGCAAAGT GGATCCAAAT
GCTGAGTTAA ATGTGATTTC CATGCTGCTC TCTCGCCAAT GGTACAGCAA GCCGGGCGAT
GGTGGCACGC AGGAAAATGT AGCGCTAACC AGCGCAAGCT TTTCAGCGGG AACGGGCATT
CTTTCATCCA GAATTTCTCG CGTTATTCAA ACCATTGGTG GCTTAGAGAG CTTTAACGTT
AATGTTGGTA TGGATAAAAA AGGCGAACTA AGTGGTCTCG ACCTTTACTT TGCGGTGAAC
GTGCCGGGCA CCGATGGTAA GGTGCGCGTT AGTGGTAGTG GCAGCGCTAA TGATCCTCGA
ACGGCAAATG CCTCAACAGC TTACGGTAGC AATCAAAAAG TGGAGTATCG CGTAACGCCA
AAAGTATATC TTGAAGCTTC GCATAGTTCA GGTCAAAATA GTGGAATAAG CAGTAGCAGT
TCCACCTTAC AAAAACCAAC GGACACGTGG GGTGTAAGCC TTTCCTATAA AGAGCGTTTT
CACCATTGGG ATCAATTTTG GAAAAAGCTA CTACCCTTTT CATCCGATAA AGCATCCGAT
AAAACGCCCA ATAAGGTGCC CGATAAAGCA TCCAATAAAA AAGAGAATAA GCCTAACGAA
TAA
|
|---|
| Protein sequence | MQSFKHISLK ALAGLLLSVL LVALMALVLL NSGSVDRAAR ALAMQLFQKE LHGRLEIDEL
HLTFPNHVTL LHPRVYAPNE REPVVEAARM TARFHFLALL QPDIKKLAFQ SLEAQRLKVR
LVQNEQGSLN IERAFASRYP DTTKTGIEEY FCKQLSLKQA SFSYSFIKDG KEIPLARANN
INAQLRSFTA GKALVKGEIQ EFQSNIASHA LVVQKMQGRF FFSDKRSEVL DLQTRIGNSH
AILSATLEGV SLFKPSLLQQ VAQSNAFVAI EEIDLHSNDV KRLFPSLPLL EGIYQVKATA
KQQNGTLELR EAQLVYRKSK LALQGTIQHP FESNKLQYNL QCDSSKVSSE LLTALITNKE
DQQLVTSLKS IGDITLAGKL SGNLSALQAD VQSLTNVGMV GFKGAIERQP NNSFAAHGNV
ALNALKPHLI LGMADVKSQL NATGTMELLV EPNALPEVAL ALQLQNSFWQ HLNVTKGTLS
FRHKKQLYEG ALSLSNGSEN LAVQGTVNLN SAQPTYDLTG TTYKLNVGQL LQSKNFSTDL
NSRFTLQGEG FDLRQLNLQS SVVCAPSVIN DVVLPNGTAA TLSIAQQGTA SRVKVTSDFF
DVTAEGHYTF EDLTALGWMA LSGISHEVAR LNIWGETAQL NPPANMLTPQ PFTVTYQLAL
HNIAPLLSII APLQQIAMQG TAQGKAEHNG GAYTIAGTID LNNLIVEEEF AAKRIHLQGS
LRGNSNGILE AQGRGAIAAL RVGKQKVRNT NVTAAYVPTT LTSSIDVDVA DVVQRVSTSF
AMKQQGSGYL LDVQQLNVQD REGSWQANNN LPIVLDKEVL RFNNFTLMRG AQKAVLQGEL
SNNRASAFTC TLSSLQMNEL QHFMLNAGLE KLQGIVSATL HISGVPGAKQ SSISVRADNV
AYDDLMIGIV QGSARHSNNL LHFELQSEAP AMVNGIQSAQ RSNALLSTIE GSGTIPLELK
YYPFKLRVNE QQNVHATFRS DNLSARFLEY LLPFFSAAEG TIPTLCTIEG SAAKPLISLH
SRLQDTRITV KPTHVSYRLD GDIYATPQAL ELRNITLSDN NNGKGSIRGF VHLEKLQPSR
LELAASCNNL LFYNKKDQQD DTSFGSIVGS TRNFTLTGSL RSPIVEGEVQ IDRADYSLYS
AGANESAQYV GIDNTISFVA RNPKPKAPKA KELKSGGSKE FYYSLIDILT IHNLRISSPM
PLKYTTIFDR IRGEELETTL SNLSLVVNKN SQRYRMFGSV QVTSGTYRFS NASFELQPGG
SITWNNVDMR SGVLENLYGR KYINALNPQS GERDDVHLLL AMTGTLNEPQ VAMGYYLNDQ
TQPYASSTTI GTETSKVDPN AELNVISMLL SRQWYSKPGD GGTQENVALT SASFSAGTGI
LSSRISRVIQ TIGGLESFNV NVGMDKKGEL SGLDLYFAVN VPGTDGKVRV SGSGSANDPR
TANASTAYGS NQKVEYRVTP KVYLEASHSS GQNSGISSSS STLQKPTDTW GVSLSYKERF
HHWDQFWKKL LPFSSDKASD KTPNKVPDKA SNKKENKPNE
|
|---|
| |