| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1541 |
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| Symbol | |
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| ID | 3746600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2020049 |
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| End bp | 2021623 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637774081 |
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| Product | phosphodiesterase |
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| Protein accession | YP_379839 |
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| Protein GI | 78189501 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00592062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATTG TTATAAACCT CTTATTGCTT GTATTAGCGG CTCTTGTGGC GTTTGTTGCA
GGCTTTTTTA TTGGGCGCTA CTTTCTTGAG CGCATTGGTA CTACAAAGGT TTTAGAGGCT
GAAGAACGAG CGGTGCAAAT TGTGCAGGAA GCTCAAAAAG AGGCAAATGA GTACAAGGAA
TTAAAGGTTA GCGAAGTTAA TCAGGAGTGG AAAAAAAAGC GTCGTGAGTT TGAGCAAGAT
GTGCTTATTA AGAACAACAA ATTTGCACAG TTACAAAAGC AGTTGCAGCA ACGCGAAGCG
CAACTGAAAA AGCAATCGCA AGATGTGCGC GATGCTGAGC GCAAATTGCA AGATCAGCGC
AAAGAAGTAG AGCAGTTAAG TGATTCGGTG AAGCTTCGTG CTACTGAGCT TGAGCGCGTT
ATTGTGGAGC AAAATCAACG TCTCGAAAGC ATTAGCAATC TGCAAGCTGA TGAGGCTCGC
CAAATGCTTA TTGATAATAT GGTTACACAA GCACGCGAAG AAGCAAGCAA CACCATTCAC
CGCATTCACG AAGAGGCTGA GCAGCAAGCC ACGCGCATGG CAGAAAAAAC CCTCATTACG
GCTATCCAGC GCATCTCTTT TGAGCAAACC ACTGAAAATG CTCTTTCGGT AGTTCACATT
CAAAGTGATG AATTAAAAGG GCGCATTATT GGTCGTGAAG GGCGCAACAT TAAAGCTTTT
GAAAATGCTA CTGGGGTTGA CATTATTGTT GACGATACCC CCGAAGTGGT TATTCTCTCC
TGCTTTGATC CCTTGCGCCG AGAGCTGGCA AAACTCACCC TTAAAAAATT GCTTGCCGAT
GGCATTATTC ATCCCGTAGC TATTGAAAAA GCTTATGCGG ATGCTACCAA AGAGATTGAC
GATGTTGTCT ATAGTGCGGG CGAAGAGGTG GCGGCATCGC TCCAACTTAA CGACATTCCC
ACCGAAGTGA TTGCGCTTCT TGGCAAAATG AAGTTCCACA CCGTGTATGG GCAGAACTTG
CTACAACATA GCCGTGAAGT AGCAATGCTT GCAGGCGTTA TGGCGGCAGA GTTAAAGCTT
GATGCACGTA TGGCAAAACG GGCAGGTTTA TTGCACGATA TTGGCTTAGT GCTGCCCGAA
AGCGATGAGC CACATGCAAT TACGGGCATG AATTTTATGA AGAAATTTAA TGAGTCAGAC
CAACTGCTTA ACGCTATTGG CGCTCACCAT GGTGATATGG AAAAAGAGTC GCCACTTGCC
GATTTAGTTG ATGCCGCCAA CACCATTTCG CTTTCACGTC CCGGTGCGCG TGGTGCCGTA
ACGGCTGATG GCAACGTTAA ACGCCTTGAA AGCCTTGAAG AAATTGCAAA GGGCTTCCCT
GGAGTGTTAA AGACCTATGC GTTACAAGCA GGGCGCGAAA TTCGTGTGAT TGTGGAAGGC
GATAACGTCA GCGATTCGCA AGCCGATATG CTTGCCCACG ATATTGCTCG TAAAATTGAG
TCGGAAGCGC AATATCCCGG TCAAATTAAA GTTTCCATTA TTCGCGAAAA GCGTTCAGTG
GCTTACGCCA AGTAA
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| Protein sequence | MGIVINLLLL VLAALVAFVA GFFIGRYFLE RIGTTKVLEA EERAVQIVQE AQKEANEYKE
LKVSEVNQEW KKKRREFEQD VLIKNNKFAQ LQKQLQQREA QLKKQSQDVR DAERKLQDQR
KEVEQLSDSV KLRATELERV IVEQNQRLES ISNLQADEAR QMLIDNMVTQ AREEASNTIH
RIHEEAEQQA TRMAEKTLIT AIQRISFEQT TENALSVVHI QSDELKGRII GREGRNIKAF
ENATGVDIIV DDTPEVVILS CFDPLRRELA KLTLKKLLAD GIIHPVAIEK AYADATKEID
DVVYSAGEEV AASLQLNDIP TEVIALLGKM KFHTVYGQNL LQHSREVAML AGVMAAELKL
DARMAKRAGL LHDIGLVLPE SDEPHAITGM NFMKKFNESD QLLNAIGAHH GDMEKESPLA
DLVDAANTIS LSRPGARGAV TADGNVKRLE SLEEIAKGFP GVLKTYALQA GREIRVIVEG
DNVSDSQADM LAHDIARKIE SEAQYPGQIK VSIIREKRSV AYAK
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