Gene Cag_1518 details

Gene Information

• Locus tag: Cag_1518
• ID: 3747152
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 1992193
• End bp: 1994019
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637774058
• Product: GTP-binding protein TypA
• Protein accession: YP_379816
• Protein GI: 78189478
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.678291
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCTG CTAAGAATAT CAGAAACATT GCCATTATTG CTCACGTTGA TCATGGAAAG 
ACCACTCTTG TTGATTCAAT TTTTCAAGTA ACGGGCACTT TTCGCGAAAA TCAGCAAATG 
AGTGCCCGTA TGCTCGACTC CAACCCTCAG GAGCGAGAGC GCGGGATTAC CATTTTCTCC 
AAAAATGCTG CTGCTCGCTA TAAAGATCAT AAAATTAACA TTGTTGACAC TCCAGGGCAC 
GCCGACTTTG GTGGTGAGGT TGAGCGCATC TTAAAAATGG TGGATGGCGT TTTGCTTTTG 
GTTGATGCGT TTGAAGGTCC TATGCCACAA ACAAAGTTTG TGCTTCGCAA AGCGCTTGAG 
CTTCACCTTA AGCCTATTGT GGTTATTAAC AAAATTGACC GTCCGCAATC TGACCCTATT 
AAAGTACACG ATCAGGTGCT TGACCTTTTT ATTGCGCTTG GTGCCGAAGA GGAGCAGCTT 
GACTTCCCTT ACCTCTTTAC ATCAGCAAAA CTTGGCATTG CGAAGTACAG CATGGATGAT 
GAGGATGGCG ATATGAGCTT GTTGCTTGAT ATGATTATCA ACGAATTGCC AGCTCCCGTT 
ACCAACGACG AGGATGGCTT TCAAATGCTT GTTACCTCGC TTGATTACAA CGACTACCTC 
GGTAAAATTG CTATTGGGCG CATTCATCGT GGTACAGTAA CCCCAGGCAG CCAACTTGTG 
GTGGTTGATC CCGATGGCAT TTTAAGCAAA GGAAGTGTAA CGAAGCTTTT CCAATTTGAT 
CGCTTGCAGC GCGTTGAAGC TACTGAAGCA TCATCGGGTG ATATTATTGC ACTTGCCGGT 
ATTGCTGAGG CAACGGTGGG CATGACGCTT GCCGCTGCCG ATAAACCTGA TCCGCTTGAT 
TCGTTTGATA TTAGCAAGCC AACACTCTCC ATGCTTTTTT CGGTCAACGA TTCACCCTTT 
GCCGGATTAG AAGGTAAAGA GGTTACCAGC CGCAAAATTC GTGAGCGCTT AATGAAAGAG 
AAAATGACCA ACGTGGCACT GCATGTTGAA GAAACCGATA GCGCCGATAC CTTCCGTGTT 
GCAGGACGTG GTGAATTACA CCTTTCGGTG CTGATAGAAA CCATGCGCCG CGAAGGGTAC 
GAACTTGCTA TTTCCCGCCC TGAAGTGATT ATGCACCGCG ATAGCGATGG TCATTTGCTG 
GAGCCAATTG AGCACGTAAC CATTGATATT CCTGAAGAAT ACACGGGCGT GGTTATTGAA 
AAAATGGGAC GTCGTAAAGC TGAAATGACC AACATGACCA CCCTTCGTGG TGGTATGACG 
CGCATGGAGT TTGAAATTCC TACGCGCGGG TTAATTGGCT ACAACCTTGA GTTCACCACC 
GATACCAAAG GTGAAGGTAT GCTTTCGCAC GTTTTCCACA ATTATCAGCC CTTTAAAGGC 
AAGCTTCCAG CTCGCGAAAC AGGTGCCCTC GTCTCCTCCG AAACAGGTAT TTGCGTCGCT 
TACGCACTCA GCAGCCTTGA CGATCGTGGA ACCTTTTTTG TGCCACCAAA TACCAAAGTG 
TATGGCGGTA TGATTGTAGG TGAATCAACA CGCGGGCTTG ATATTACCAT GAACGTCTGC 
AAAACAAAAA AGCTCACCAA TATGCGAGCT TCAGGAACGG ATGAATCGCT GCGTCTTGCA 
CCGCCACGCC TGATGTCGCT TGAGCAAGCG CTTGAGTTTA TTAATGATGA TGAATTGGTA 
GAAGTAACGC CACAAAGCAT TCGTTTACGC AAAAAAATTC TTGATTCTAA TTTGCGTGCA 
AAAGCTGTTA AAAAAGCTAA AGAGTAA 

 

Protein sequence

MSAAKNIRNI AIIAHVDHGK TTLVDSIFQV TGTFRENQQM SARMLDSNPQ ERERGITIFS 
KNAAARYKDH KINIVDTPGH ADFGGEVERI LKMVDGVLLL VDAFEGPMPQ TKFVLRKALE 
LHLKPIVVIN KIDRPQSDPI KVHDQVLDLF IALGAEEEQL DFPYLFTSAK LGIAKYSMDD 
EDGDMSLLLD MIINELPAPV TNDEDGFQML VTSLDYNDYL GKIAIGRIHR GTVTPGSQLV 
VVDPDGILSK GSVTKLFQFD RLQRVEATEA SSGDIIALAG IAEATVGMTL AAADKPDPLD 
SFDISKPTLS MLFSVNDSPF AGLEGKEVTS RKIRERLMKE KMTNVALHVE ETDSADTFRV 
AGRGELHLSV LIETMRREGY ELAISRPEVI MHRDSDGHLL EPIEHVTIDI PEEYTGVVIE 
KMGRRKAEMT NMTTLRGGMT RMEFEIPTRG LIGYNLEFTT DTKGEGMLSH VFHNYQPFKG 
KLPARETGAL VSSETGICVA YALSSLDDRG TFFVPPNTKV YGGMIVGEST RGLDITMNVC 
KTKKLTNMRA SGTDESLRLA PPRLMSLEQA LEFINDDELV EVTPQSIRLR KKILDSNLRA 
KAVKKAKE