Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1478 |
Symbol | |
ID | 3747969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1944524 |
End bp | 1945501 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637774013 |
Product | glycosyl transferase |
Protein accession | YP_379777 |
Protein GI | 78189439 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00283905 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGAGT ATTTAATATC AGTTATTATT GCAGTCTATA ACCCAAATGC TATTTTTCTT CAAAAAGCTA TTCAGTCAGT ATTAAATCAA AGTTTTCCTG TATTAGAATT AATATTGGTT AATGATGGTG GAAATGAAGA ATTTCGTAAT TTATTGCCTA CAGATTCTCG AATTAAAGTA TTTCGAAAAG TAAATGAAGG TGTTGCCCTT GCTCGTAATT ATGCTATTCA ACAATCTCAA GGTGAATATA TAGCCTTTCT TGATCAAGAT GATTATTGGT TTCCACATAA ACTTGAGAAA CAAATTTCAA TGATTCCATC TGATCAACCA CAATGTTTTG TGGTTTCTCC TATTCAAATT ATTGATTCAG TTGGAAGTGT TGTTGATAAA AATAACTTAG CAGCAACAAG TCTGTATAAA AATAACTTAT CTCTTGTAAA CCCTTTTTTA GGGTTATGTT ATGGTAATTA TATTTATTCA TCCACGCCAT TAATTCATAA AAAAGTTTTC GAAATTGTTG GGTTATTTGA TGTTGCTGCA CAGCCTCATG ATGATTGGGA TATGTATTTA AGAATACTGT ATGCAGGTGT TCCTTTTTTC AGATATACGG ATTCTGCATT GTCAGTTTGG CGAATACATG ATTCTAATGA GTCGCATAAA ATTAAGGCAA TGTTATTATC AAAATGTTAT GTTGAAAAGA AATTGTTAGA ATTGAATTTA GTTGCTCCAG TTAGAGAGGT TGTTACGATT AATTTATTGT TTGATAATGT TGAATTAGCA CATTTGTTTT ATAAAGAAAA TAATACTCCT GAATTTCGTT TTCTTATGAA AAGATATTTA CCATCTCTTA TTCGTGTTTT TTTTGTTCGG TTCAATAAAA CATTTGAACT TGATAAAATT TTGTTTCGTC GTATTCGTAA GATTATCCTT AAGTCATTTC GGCGTTACAT TGTTTCTTTT TTGAGATGTA ATGGATAG
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Protein sequence | MREYLISVII AVYNPNAIFL QKAIQSVLNQ SFPVLELILV NDGGNEEFRN LLPTDSRIKV FRKVNEGVAL ARNYAIQQSQ GEYIAFLDQD DYWFPHKLEK QISMIPSDQP QCFVVSPIQI IDSVGSVVDK NNLAATSLYK NNLSLVNPFL GLCYGNYIYS STPLIHKKVF EIVGLFDVAA QPHDDWDMYL RILYAGVPFF RYTDSALSVW RIHDSNESHK IKAMLLSKCY VEKKLLELNL VAPVREVVTI NLLFDNVELA HLFYKENNTP EFRFLMKRYL PSLIRVFFVR FNKTFELDKI LFRRIRKIIL KSFRRYIVSF LRCNG
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