| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1460 |
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| Symbol | |
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| ID | 3746429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 1925459 |
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| End bp | 1926226 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637773994 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_379759 |
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| Protein GI | 78189421 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000738183 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTAACG TTCACGCACA ACAGGGGAGT GCGCAGGAAG CGCCACCGCC CGGAGAGTTG
CTGCTGATTG ATAAGCCGCT TGATTGGACG TCGTTTGATG TGGTGGCAAA AGTGCGTAAC
ACCTACCGCA AATGTGGCTC TAAGCGTAAA GTGGGGCATT GTGGTACGCT TGATCCTAAA
GCTACGGGTT TGCTTATTGT TGCCACAGGG CGCAAAACCA AAGAAATTTC ACAGCTTGAG
CAACTCGATA AAGTATATGA TGGTGTTATC AAGCTGGGAG CCATCACTGC CAGCCACGAT
ACCGAAACAC CTGAAGAGCA GTTGTGTGAT GTAGCGCATT TGAGCGAAGC CGAACTTCAT
GCCGTTGCAG CAACCTTTAT TGGCAATCGT TTGCAGCAGC CACCCATGCA CTCCGCCGCT
TGGCACAATG GGCGTCGCTT ATATGAACAT GCCCGCAAAG GTGAGGTTAT TCGTGAACGT
AAAGCGCGCG AAATTGTGGT GCATCGCTTT ACCATAACCA ACGTTGCATT GCCGTTTGTT
TCGTTTGAGC TGCATGTTTC CAAAGGAGCC TACATTCGCG TTATAGCCGA TGAGTTTGGC
GCAGCGTTGG GCGTTGGCGG CTATCTTGCG GCGCTTCGCC GTACAGCAAT TGGGGAGTGG
CAGTTAACCA ATGCGCTTTC AGTAAACGAT ACTATTGAGC AGATTCATAA CAACGCCTCA
AAAGGTGCTT TGTGTGGCAC TGCCTCCACT ATACATCCTG CAACATAA
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| Protein sequence | MCNVHAQQGS AQEAPPPGEL LLIDKPLDWT SFDVVAKVRN TYRKCGSKRK VGHCGTLDPK
ATGLLIVATG RKTKEISQLE QLDKVYDGVI KLGAITASHD TETPEEQLCD VAHLSEAELH
AVAATFIGNR LQQPPMHSAA WHNGRRLYEH ARKGEVIRER KAREIVVHRF TITNVALPFV
SFELHVSKGA YIRVIADEFG AALGVGGYLA ALRRTAIGEW QLTNALSVND TIEQIHNNAS
KGALCGTAST IHPAT
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