Gene Cag_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1448 
Symbol 
ID3746646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1915969 
End bp1916514 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content45% 
IMG OID637773982 
Productouter membrane protein OmpH 
Protein accessionYP_379747 
Protein GI78189409 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTT CTTCATTTTT TGCCGTTTCG CGCCGCATTG CAACAGGCGT TATGTTAAGC 
CTTACCCTTG CTGCGCCACA AGCTTTTGCA GCCCAAGAGA GCGGTAAAAT TGGCGTTATT
GATTCCGCCA AAATTCTCCA GCAACTTGCC GACACCAAGC AAGCCGAAAG TGCCTTGCAA
GCAGCAGCAG CTCCCATGCA AAAAGAGTTA GACCGCATGA ATCAAGATTA TCAACAAGCT
GTAGCTGCAT ATCGCCAAAA AGCTGCGACA CTTGCAAAAA CAGCACGCGA ACAAAAAGAA
AAAGAGCTTA CCACAAAAGG CAAAGCGATT GAAAAATATC AGCAAGACAA CTTTGGACGT
GGTGGCGCTC TTGAAAAAAA GCAACAAGAG CTTTTTAGCC CCGTCCGCCA AAAAGTGCTA
ACAGCCGTTG AAGCTATTGC TCAAAAAGAG GGAATTTCTG TAGTGGTTGA AAAAAACAGT
GCCATTTACG CTACTACTGA TGCCGATATT ACCTACAAAG TGCTCAACCA ACTGAACGTT
AAGTAA
 
Protein sequence
MKTSSFFAVS RRIATGVMLS LTLAAPQAFA AQESGKIGVI DSAKILQQLA DTKQAESALQ 
AAAAPMQKEL DRMNQDYQQA VAAYRQKAAT LAKTAREQKE KELTTKGKAI EKYQQDNFGR
GGALEKKQQE LFSPVRQKVL TAVEAIAQKE GISVVVEKNS AIYATTDADI TYKVLNQLNV
K