| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1409 |
|---|
| Symbol | |
|---|
| ID | 3747168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1876262 |
|---|
| End bp | 1877200 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637773945 |
|---|
| Product | membrane-fusion protein-like |
|---|
| Protein accession | YP_379710 |
|---|
| Protein GI | 78189372 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA ACATTGGGTT AGCTCTTGGT GGAGCCGTAC TCTTTATTAT GATACTGCTC
TTCTTTTTTA ACCCATTTAG CGCTTCCGAT AAGAGCACAA CGCTTGTAAC CGTGCAGCGT
CGCGATGCTG TGCCGCCACC AAATTCTACG CTTCACGACT CAACGTCGTA TGCTCATGCA
ACAGAGGAGG CTGGCTTTAT TTCGGGCATT GTTGAGCCTT ATAACGATGC TACTATTGGC
TTAGTGGTGC AGGGTAAAAT TGCTTCTATT TGGGTGCCTG AAGGGCGACG CGTTGGGCGT
GGTGGAATTA TTCTTACCCT TGAAAAAAGC CAAGAAGAGC TTGAAGTAGC GCGTCGTAAA
ATTATTTGGC AAAATCAAGC GGAATTAAAA TCAGCCGAAG CGGTAGTAAC AACATTAACC
GAGACCTTAC GTTTAAACCG CAAATTGTAT GATGAAACAC GCTCAGTGAG TCGTGAGGAA
CTTGATAAGT TATCCTTGCA ATGGGAAAAT GCGGTGGCTG AGCGCGACCG TTTACGCAAC
CAAAAGCTCC GTGAAAAGGT TGAGTATGAA ATTGCGGCTA AAACGCTTGA TAGTCGTCTG
CTGAAAGCGC CATTTAGTGG CACCGTTGAA AAGGTATTTT TAAAGGTGGG TGAAATTTAC
CAACCGGGTC AACCTCTGGT GCGCTTAATT GATGCTGATC GCTGTGTACT GACGGCAAAT
ATTGATGACA CCAAGAATTA TAAGTTCAAG CAGGGAATGA CGGTTGAATT GCATGTTATG
GAGGGTAGTA GTGAGGTGAT TCGTAAAGGC ACCATTACTA AAGTGCCTAT TGCGGTTGAC
CCTGCCAGCG GCGTGATGCA GGTAAAAGCC TTTTTTGATA ACCGTGATGG ACGCATTAAG
CCGGGTACAA CCGCTAAAAT GCGGGTGCCT CAGGAGTAA
|
|---|
| Protein sequence | MKKNIGLALG GAVLFIMILL FFFNPFSASD KSTTLVTVQR RDAVPPPNST LHDSTSYAHA
TEEAGFISGI VEPYNDATIG LVVQGKIASI WVPEGRRVGR GGIILTLEKS QEELEVARRK
IIWQNQAELK SAEAVVTTLT ETLRLNRKLY DETRSVSREE LDKLSLQWEN AVAERDRLRN
QKLREKVEYE IAAKTLDSRL LKAPFSGTVE KVFLKVGEIY QPGQPLVRLI DADRCVLTAN
IDDTKNYKFK QGMTVELHVM EGSSEVIRKG TITKVPIAVD PASGVMQVKA FFDNRDGRIK
PGTTAKMRVP QE
|
|---|
| |