| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1403 |
|---|
| Symbol | metG |
|---|
| ID | 3747162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1867431 |
|---|
| End bp | 1869548 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637773939 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_379704 |
|---|
| Protein GI | 78189366 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.349899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACTA TGCCTCATTT TTCGCGCACG CTTGTTACTA CAGCTCTCCC TTACGCCAAC
GGTCCAGTGC ATCTCGGTCA TTTAGCGGGA GTTTATCTTC CAGCCGATTT GTATGTCCGT
TATAAACGGC TCAAGGGCGA GGATATTATT CATATTGGAG GTTCTGACGA GCATGGTGTG
CCGATTACGA TTTCGGCTGA AAAAGAGGGC ATTTCGCCAC GCGATGTGGT GGATCGCTAT
CATGCCATGA ATCTTGATGC CTTTACGCGC TGCGGCATCT CTTTCGATTA TTATGGACGT
ACTTCGTCAG CCGTGCATCA TGCAACAGCG CAAGAGTTTT TCTCCGATAT AGAGCAAAAG
GGCATTTTTC AGCAAAAAAC TGAGAAGCTC TTTTTTGATC TGCAAGCGGG ACGATTTCTT
TCTGACCGAT ATGTTACGGG TACCTGCCCT GTGTGCAACA ACCCCGAAGC TAACGGCGAC
CAATGCGAGC AATGTGGCAC ACATCTTAGC CCGTTGGAGT TGCTTAATCC CAAAAGCAAG
CTTTCCGATG CTACGCCCGA ATTGCGCGAA ACCTTGCACT GGTATTTTCC TCTTGGGCGC
TTTCAAGCAG CGCTTGAGGA GTACGTTAAT AGCCACGAAG GGGAGTGGCG CCCAAATGTG
GTGAATTACA CGCGCACATG GTTCAAGCAA GGTTTAAACG ACCGTGCCAT TACGCGCGAT
CTTGATTGGG GCGTTGCCGT ACCATTGCAA AGTGCGGAAG CGGTTGGTAA GGTGCTGTAT
GTGTGGTTTG ATGCCGTGCT TGGCTACATT TCATTTACTA AAGAGTGGGC AGCATTACAA
GGCAATGCAG AGCTATGGAA AACCTATTGG CAAGATCCTG AAACACGTCT TATCCATTTT
ATAGGAAAAG ATAATGTGGT GTTCCATACG CTTATGTTTC CATCAATTCT TATGGCATGG
AATGAAGGGA AAACAACGGA TTGCTATAAT TTAGCCGATA ATGTTCCTGC ATCTGAATTT
ATGAATTTTG AGGGGAGAAA ATTCTCTAAA TCGCGCAACT ATGCCGTTTA TCTTGGAGAG
TTTCTCGATA AATTCCCTGC CGATACCTTG CGTTATAGCA TTGCTATGAA TTATCCCGAA
AGCAAGGATA CCGACTTTAG TTGGCAGGAT TTTCAAAATC GCACCAATGG CGAGCTTGCT
GATACGCTTG GCAACTTCAT CAAGCGATCC ATTGATTTTA CCAACACCCG CTTTGAAGGC
GTTGTGCCTG CTTCAGTAAC TAAAGAAGAG TGGGACAATC TCGGTATTGA TTGGCAAGCC
ACGTTAGAGC AGCTTGATAG CGCTTATGAA GGCTTCCACT TTCGTGATGC AGCCACGCTT
GGCATGGAGA TTGCTCGTGC AGCCAATCGT TACCTCACGT CGTCCGAGCC TTGGAAAGTA
ATTAAGGTTG ACCGTGAAGC TGCCGCTACA ACAATGGCGC TGTCGCTTAA CCTCTGCCAT
GCGCTCTCCA TTGCGCTCTA CCCCGTTATT CCCGAAACCT GCAACCGCAT TCGCGCCATG
CTGGGCTTTA GCGAACCGCT TGAAGCAACC ATTCAGCGTG GTACATCGCT CTTGAGCAGC
TTGCTAACGC CAACGCTTCA GCAAGGGCAC AAACTGAGGG AGCATTCGGA AATTCTCTTT
ACCAAAATTG AGGATAGCGC TATTGCCCCT GAGCTTGAAA AAATTGCAAA ACTTATTGCC
GAAGCCGAAA AGCGTGAAGC GGCTTTAGCC GAAAGCCGCA TTGAGTTTAA GCCAGCCATT
AGCTTTGATG AGTTCCAAAA AGTTGACCTT CGCGTAGCAA CCGTTGTGGC GGCTGAGCCT
GTAGCAAAAG CCAACAAGTT GCTAAAATTG CGCGTGCAAG TAGGGAGCCT AACGCGCCAA
GTGCTTGCAG GCATTGCAAA GCATTACACG CCTGAGGAGA TGGTGGGCAA GCAGGTGCTG
CTTGTTGCTA ACCTTGAAGA GCGCACCATT CGTGGTGAAC TGTCGCAAGG GATGATTCTT
GCGGTTGAAA ATAGTGATGG CAAACTCTTT ATTGTGCAGC CATCAGGTGA GGGAATTAAC
GGTCAGTCGG TGCAGTAA
|
|---|
| Protein sequence | MSTMPHFSRT LVTTALPYAN GPVHLGHLAG VYLPADLYVR YKRLKGEDII HIGGSDEHGV
PITISAEKEG ISPRDVVDRY HAMNLDAFTR CGISFDYYGR TSSAVHHATA QEFFSDIEQK
GIFQQKTEKL FFDLQAGRFL SDRYVTGTCP VCNNPEANGD QCEQCGTHLS PLELLNPKSK
LSDATPELRE TLHWYFPLGR FQAALEEYVN SHEGEWRPNV VNYTRTWFKQ GLNDRAITRD
LDWGVAVPLQ SAEAVGKVLY VWFDAVLGYI SFTKEWAALQ GNAELWKTYW QDPETRLIHF
IGKDNVVFHT LMFPSILMAW NEGKTTDCYN LADNVPASEF MNFEGRKFSK SRNYAVYLGE
FLDKFPADTL RYSIAMNYPE SKDTDFSWQD FQNRTNGELA DTLGNFIKRS IDFTNTRFEG
VVPASVTKEE WDNLGIDWQA TLEQLDSAYE GFHFRDAATL GMEIARAANR YLTSSEPWKV
IKVDREAAAT TMALSLNLCH ALSIALYPVI PETCNRIRAM LGFSEPLEAT IQRGTSLLSS
LLTPTLQQGH KLREHSEILF TKIEDSAIAP ELEKIAKLIA EAEKREAALA ESRIEFKPAI
SFDEFQKVDL RVATVVAAEP VAKANKLLKL RVQVGSLTRQ VLAGIAKHYT PEEMVGKQVL
LVANLEERTI RGELSQGMIL AVENSDGKLF IVQPSGEGIN GQSVQ
|
|---|
| |