Gene Cag_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1395 
Symbol 
ID3746579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1858140 
End bp1858910 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content44% 
IMG OID637773931 
Productanti-anti-sigma factor, putative 
Protein accessionYP_379696 
Protein GI78189358 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.392973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACT CAATAACAAA CCGTAGAGAA CTCACCGTCC TAAAAATTGA GGAAGAGGTG 
TTTGACTTTC GTCATCGCGA CGATTTTACC CAAATCGTTG ATAGTTTGCT GCAACAAGAG
GAGAGTAAAA ATCTTCTTAT TGATTTTTCG CCCGTAAAAG CCATTGACTC CGCTGGCATT
GGAGCCATTT TGCAAGCTCA CCAATTAGCC AACCGCAATG CAGGACTTGC GGTGTTTGTA
GCACTTTGCA AACAAATTAA AGACCTCCTT AAACTTACCA ATCTCGATAA ACAGCTCTAC
ATTTTCTCCT CAATTAACGA GGTTATGACC TTAGTGGAAC CAAACGCTAA GCCCAAAAAG
AACAATCGTG CAAAATCAGC CGCACCTGTG GATGAAATAG ATGAATTGCT GGGCGACGAC
CTCGATATTA TTGGCGCTCC CGAACTTGGG GACGAAAAAC TTGCTGGCGT TATAGATGAT
GAGCTTCATG TTGACGATAG CGAAGAAGAG CACGATAAGC CTGAAATGGA TGACGATGCC
GATGAGGATG ACGATGAGCA TGTAGAAGAA GAAAAAGCGC CTGCCCCAAA AGAACCAAAA
GCTGCAAAGG CGAAAAAAGA GCCAAAGCCA AAAAAAGAGA GCAAAACACC ACCAAAACCT
GCTGCAAGCA AAGCTCCAGC AAAAACCACA ACAAAAGCTC CTGCAAAAGC TCCAGAAAAA
ACCACGAAGC GCGCTCAGCC TAAAAAACGC GTTGAGAAGG AAAGCGAATA A
 
Protein sequence
MKHSITNRRE LTVLKIEEEV FDFRHRDDFT QIVDSLLQQE ESKNLLIDFS PVKAIDSAGI 
GAILQAHQLA NRNAGLAVFV ALCKQIKDLL KLTNLDKQLY IFSSINEVMT LVEPNAKPKK
NNRAKSAAPV DEIDELLGDD LDIIGAPELG DEKLAGVIDD ELHVDDSEEE HDKPEMDDDA
DEDDDEHVEE EKAPAPKEPK AAKAKKEPKP KKESKTPPKP AASKAPAKTT TKAPAKAPEK
TTKRAQPKKR VEKESE