Gene Cag_1381 details

Gene Information

• Locus tag: Cag_1381
• ID: 3746565
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 1845111
• End bp: 1847096
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637773917
• Product: alpha-amylase family protein
• Protein accession: YP_379682
• Protein GI: 78189344
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0366] Glycosidases

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACTT CTCCCAACAA CGCTCCCTGT AAAGCCACCT GCACTGTGCA AACACCTCAT 
CTTGATTTAC TTCTTCAAAC ACTTGAAAGC CTGACCCCAA AGCAACCTGC GCAACCTGCG 
CCCCCTGCAT TAAGTCAGCA GCCTTACCGC GTGCCTACGT TATGGCAAAG CGACAACGTA 
GGTGTTGAGG TGATTGAGCC TGCCGAGTAT TACGCTCGCT GCATTCGCTC GTTGCTTGAC 
TCAGCGCACA AAGCGCAACC GCAAGATATT GATGGTGATT GGAAGCGCCA TGCCGTTGTT 
TATAATCTTT TTATTCGCTT AACCACAGCC TTTGACCATA ATGGCGATGG TGAACTCAGT 
AATGAGCCGA TGGAGTGCGG TTTTCGAGAA ACGGGTACCT TGCTGAAAGC TATTGCACTA 
CTCCCTTATA TTGAACGACT TGGCGCTAAC ACGCTCTACC TACTCCCCCT TACTGCTATT 
GGAGAACAAA ACCGTAAAGG CTCGCTTGGC TCACCCTACG CTGTAAAAAA TCCCCGCACG 
CTTGACCCCA TGCTTGCCGA ACCTGCGCTT GGCTTATCGG CGGAAATATT ACTTAAAGCT 
TTTGTGGAAG CCGCCCATTT GCGCAACATG CGTGTGGTCT TTGAATTTGT GTTTCGCACA 
ACGGCAGTGG ATAGCGATTG GGTTCGAGAA CATCCTGAAT GGTTTTATTG GCTCAAAGAG 
AGTGAAGCGA ATGAAACCTT TGGTGCTCCG TACTTTGAGC AAGAGCGGCT GAACGCCATT 
TATGCAGCCG TTGACCGTAA CGATATGAAT AACCTGCCTG CACCCGACGA GGCATATCGT 
GCAAAGTTTG TGGCACCACC ACAGCAGGTG GTAGAGCGTG ATGGCGCATT GGTTGGTATG 
CAAAAGGATG GCACAACCTG CCGCATAGCA AGCGCATTTT CCGATTGGCC ACCCGATGAT 
CGCCAACCAG CTTGGAGCGA TGTTACCTAC CTGAAAATGC ACCAGCACGA GGGCTTTAAC 
TACATGGCGT ACAACACCAT ACGCATGTAC GACAGCACTC TTGAACGTCC TGAATATCGC 
ACCACAAATT TGTGGGAAAC GCTTATCTCT ATTATTCCCG AATTTCAGGA TGAGTATCAC 
ATTGATGGAG CCATGATTGA TATGGGGCAC GCCTTGCCTG CGCCGTTAAA GCAAACCATT 
GTTGAACGTG CTCGCGCTAA ACGCCCCGAT TTTGCTTTTT GGGATGAAAA CTTCAATCCG 
TCGGTTGAAA TTCGTGAACA TGGCTTTGAT GCCGTTTTTG GCTCTCTGCC GTTTGTAGTG 
CACGACATTA TTTTTATTCG CGGTTTACTT AACCACTTAA ACCGTATTGG TGTTGCCCTT 
CCCTTTTTTG GAACGGGCGA AAACCACAAC ACGCCGCGCG TTTGCTTTCG CTACCCCAAA 
CAAGCCGCGG GACGTAGCTT AGCCACCTTT ATTTTCACCC TGAGCGCCAT TCTCCCCTCA 
CTTCCTTTTT TACAATCGGG AATGGAATTG TGTGAATGGC ATCCCGTGAA TTTAGGGTTG 
AACTTTACCG ATGAAGATCG CGCCACGTAT CCGTCCGAAA CATTACCACT CTTTAGCCCA 
CGCGCTTACG ATTGGGAAAA AAGCAACAAT CTTGAACCTC TCAACCACTA CATTAAGCGC 
CTACTCACCG TGCGCGAACG CTATCTTGAT GTAGTGCTAT GCGGAGATGC TGGCTCAATT 
GGCGTACCGT ATGTAAGCCA TCCCGAACTT TTTGCCGTGA TGCGTAGCGC AGGTGGAAAA 
TCGTTGCTCT TTGTGGGCAA TAGCAACCTT ACCGAAAGCC GCACAGGCAT GCTTGAGTTT 
AGTGTGGAAC AAGCTTCGTT AGTGGAGTTA ATTTCCGAGC GTCCCTATAC AATTACAAAT 
CACCGTTTAG AAGTAAGCTG CACGGCTGGC GAATGTTTAC TTTTTGAAAT TCCCTCTTTT 
TCTTAA 

 

Protein sequence

MSTSPNNAPC KATCTVQTPH LDLLLQTLES LTPKQPAQPA PPALSQQPYR VPTLWQSDNV 
GVEVIEPAEY YARCIRSLLD SAHKAQPQDI DGDWKRHAVV YNLFIRLTTA FDHNGDGELS 
NEPMECGFRE TGTLLKAIAL LPYIERLGAN TLYLLPLTAI GEQNRKGSLG SPYAVKNPRT 
LDPMLAEPAL GLSAEILLKA FVEAAHLRNM RVVFEFVFRT TAVDSDWVRE HPEWFYWLKE 
SEANETFGAP YFEQERLNAI YAAVDRNDMN NLPAPDEAYR AKFVAPPQQV VERDGALVGM 
QKDGTTCRIA SAFSDWPPDD RQPAWSDVTY LKMHQHEGFN YMAYNTIRMY DSTLERPEYR 
TTNLWETLIS IIPEFQDEYH IDGAMIDMGH ALPAPLKQTI VERARAKRPD FAFWDENFNP 
SVEIREHGFD AVFGSLPFVV HDIIFIRGLL NHLNRIGVAL PFFGTGENHN TPRVCFRYPK 
QAAGRSLATF IFTLSAILPS LPFLQSGMEL CEWHPVNLGL NFTDEDRATY PSETLPLFSP 
RAYDWEKSNN LEPLNHYIKR LLTVRERYLD VVLCGDAGSI GVPYVSHPEL FAVMRSAGGK 
SLLFVGNSNL TESRTGMLEF SVEQASLVEL ISERPYTITN HRLEVSCTAG ECLLFEIPSF 
S