Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1239 |
Symbol | |
ID | 3748272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1645671 |
End bp | 1653056 |
Gene Length | 7386 bp |
Protein Length | 2461 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637773772 |
Product | VCBS |
Protein accession | YP_379543 |
Protein GI | 78189205 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01965] VCBS repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAATA CCGTAGTTTT TATTGACAGT CGCATTAGCG ATGTTAATGC GCTTATTTCG CGCTTTGCAG TTGGTACTGA GTATTATGTG CTTGATAGTG AGCGCGATGG CATTTTGCAA ATTACGGAGG CGCTTGCCGG TAAAAGCGGC TACAGCTCTC TGCAAATTTT TTCGCATGGA ACGGCTGGCT CTTTAATGCT TGGCAGCACG GTGCTCAATA ACGCAGCGCT TAGCAATTAT ACGGCGCAGT TAGCGGCTAT TGGTGGTGCG TTAACGGCAA GTGGTGATAT TTTATTGTAT GGATGTAATG TTGCGGCTGG TGATGTTGGG CAGCAGTTTA TTGCGGCGTT GGCTGAGGCT ACGGGTGCTG ATGTTGCGGC TTCGGATGAT TTGACGGGTT CGGCGGCGCT TGGTGGCGAT TGGGATTTGG AGTATGCAAC GGGTGCTATT GAGAGCGGTG TTGATACGAA TGTGGTGCAA GAATATGATG GGGTGCTGGA ACCACCAACT ACCACAATTA CTATCACATT GCCAACGGAA GCTGAGATTA GAAATAATTC AAATATAGAT CAAGGCTATA TTACGGAAAG CACGCTTGGC TCCAATGTTA CATTGTATTT GCAAGATATT CTTGCTGTTG ATACTACTAA TTTATTGAGT ACAACAGCAC CTACCTCCTT TGTTATTTCT GTAAGTTATG GTAAAATATC ATTCCTTAAA ACTAAGGTTG ATACTATTCC AATAGTTTCT GGAAATGGCT CAAATACAGT AACGCTTACT GGTACAATTA CCCAAATTCG GACGTTATTA ACGAATAATA CGATTTCATA TGTTGGGAAT ACGGGCTTTT CTGGTATTGA AACATTATCA GCAGGTATCA GTGGTGTACT TGCAAATAAT AGTGGTAATG CGTCGGGAAG TGCTAATAGT GAATTGAGTA TTGTTGGTAT TAACGATGCA CCGACTATTC TTGATGCTAA GGCTACTTTG ACGGTATCAG AAGGAAGTTT GCTTAATGAT GTTTTTGAGG GAAGTTTTAC TCTTTCAGAT CCTGATATTG CTCATTATAT CATGCAAGCT GACATAACGG TATTGCACGG TACGTTAAAA CTATCAGGAG ATGATTTAGA TTCTGTTACA GGTAATGAAA CAAAATCTGT TACCATAACA GGTTCTCGCG CTAATATTGA GCTTGCAATA ACAGCGTTAC AATATACTCC TGATGAAAAT TATAATGGAA GTGATACGTT AACAGTAACG GTTAATGACC TTGGAACAAC TAACGTTAAT CAAGGTAATC CTGATGAAGA TAAAACTGAT ATTCATCAAG TTACCATTAG TGTTGTGAAC CATGCTCCAG TTTTGGAAAA CGATTATACT CCGATCTTGA GTGAGATTTC AGAAGATATT AATAGTAGTA TAACGGAAAC GGAAGATGGG GATAACGCTG GTACTCTTGT AAAGGATATT ATTCCTGAAA ACGATCCTAC TGATTCAATT ACGCTTGATG CAATTACCGA TGAAGATGTA ACTTCCGCAT TACAATCAAT TTACATTACG GCTGTAGATT CAACCAATGG AAAGTGGCAA TTCAAGCTTG ATGGTCAAAC TACTTGGTCA ACAATAACAC TAACGGGCGA TACCGCATTA TTGTTAAGCG AAAACAATAG TCTGCGCTTT ATTCCTAACA ATAACTGGAG CGGTACAGCA ACCTTTACGT TTGGCGCATG GGATGGAACA GGACGTGATA TAAACAATAA TAATGCCTTA TATGAAGCTG GAGATTATGT AGTTATTACG CAGCGAGGTG TGTTGAATGC TCCATTTTCT CTTGATGTTG ACACCGCTAC AATTACCGTT AATCCGGTAA ATGATGCTCC TACCTTTACA GCATTTTCAG CTCCAATCAC TCCAGCGATC ACAACAAACC AGCCAAGTTT AGCTTTAGAA GATGGCGGGA ACACTGTTGG TGAGCCTTCA ACTACTCCAA TTACCATCAC TTTTGATGAT TTAGCAACAA AAGGTAATGA GGCTGATGCA AACGATGCGG CTTATGGTGG TGCGGTAACT GCGTTTGTGG TAAAAAGAGT GCTTTCAGGT ACTCTTACTA TTGATAACAC TGACTATACA GCAGGAACGG AAGATTTAAA TCTTACTATT TCAGAAAGTC AGGATGCCTC TTGGACGCCT GAATTAAATA AAAACGGCAT ACTTAATGCT TTTACCGTTG TTGCAAAAGA CAATGATACT ACGGATTCAA AAGAATCTAC AACACCATCG GTAACCGTTA CAATAAACCT TACGCCCGTT AACGATGCGC CAACGGTAAT TCCCGCTACA CAATCAGCAA CCTTAACGGC AGGTAGTGAT GATGTTACGT CAGCATACAT CTCTATGGCG ATGTCGGACG TGGACACGGG GGATATTGTT AAAGTTGATG GAGACTGGTT AGCTGATGAA AGTGCAGCAA ACGACGGAGA AGAGCACTGG ACATCAAGTG ATGGTGGAAA AACTTATACC TTTGACGGTT CATACGGTAC TGCAACACTT TACCGTGTAG CAACAACTGA TGGACATTCT GCTGGCGAAG TTACTTACTC ATTTGATTAT GCTGATACCG ATTTAGATTC TTTAGCTGCC AATGCAACAG CAACTGATAG CTTTACCATT GTGGTATCTG ATGATGCAAA GGTAACAGCA ACTGCTGATG CTGTCTTTAC CATTAATGGT GCAAACGATG ATCCAATAAT AACAAGCGGT ACACAATCAG GTTCTGTAAT AGAAAATAGC TCTGAGACCG CGACAGGTGA TGTAAATGCA ACCGATATAG ATTACGGTAC AACTTTAAGT TATAGTGGTG ATGCTACTGG AGATTACGGA AGCCTTGATG TAACTGAGAT TGATGGTACT TGGACCTATA CCTTAACCAG CAATGCGCTT GATGATGGAG AAAGTGATAT AGAATCGTTT ACAATTACCG TATCGGATGG TGATGGAGGT AGTGCAACTC AAGATGTAAC TATTACGGTA TGGGGCGATA ATGATCCACC TACCATTACT GAGAGCGCAC AAAGTCCTGA CTACGTTACG GAAGATGGCG GAATTAACAA CGGAACTGCT GGCACATCCA GTGCTCATAT TGATGTAACA CTTAGCGATG CCGATGGTGG TGATACGGTA AGCTACGTAA CAACAGGTTG GTCTGGTTCT GGAAATACTT ATACCAAAAC CGGAACCTAT GGCACTGCAA CGCTGCACCC CAATACGCAT GTTATAGATT ATGTGCTGAA TAACAGCGAT ACCGACACAC AAGCTCTTGA TACAAACGAT GTAGTTTCTG ATTCATTCTC TATTACCGTT ACGGACGGCA CTGATTTTAC ATCGGAAACT ATTGCGTTTA CCATTCACGG CACAAATGAT GCCCCAACTA TTGATGTATC TGATACCGGT GAGAGCTTTA CCGAAAGTGA TGATGCAAGT ATGCAAACGC TTTCAGCAAC CGGCTCCATT ACCTTTGACG ATGTTGATGC AAGCGATTCG GTAAGCCTTA CCTTTGCCGA GAGCACCGAT ATTTCATGGT CGGATAGCAA TGGTGGTGGA GACTATGATA ATGAATTGGA TAGCGATTAT AGTTCTGTAA AAGCAGCGTT GCTTAATGGT TTTAGCACAA CAGCTACAGG TTGGAGCTAT AGTACAAGCG GAGGTAGTAG TCTTATTGGA TCGGAGTTTG GTGCTATACC GAGTAATTAT TTTCTACCAC CACCGTTCTC ATTTACTTCA CTGATTACAG GAGTGCTTGG TGACCAAAAT GATGTAACAG AAGGTCAGTT TAAGTATGAT GTTTACACTC TCTCCAATGT TGTAAGTGGA ACTTTGGTTT TTGCCGCTAT AGAATCAAGT GCCTTTCCAG AATACGCAAA TGTTTATACA TCTGCCAATC TTCAGTTGAG ACAGCCCATC ACTCCAAGAA TAATCAGTAA TACTACAGAC GGTAATGCAC GGATCTTGGC ATGGTTTTAT CTGCCAGGAG ATACTCTTTG GGTTGGTTCG GATGCACCTC AACAGAGTGG TGCCTACAAT CTCTACCTTG GAGGTACAAT TGCAGAAAGT GGCGATGGCG TTGACCTCGA CTTCCTTGAT GAAGACGAGC AACTCACATG GAGCTACACC GTCTCTGCTA CTGACGGCAC AGCTTCCACC ACCTCAACCG AATCGGTAAG CTTTACCATT ACCGGCGAAA ACGATGCGCC GACCATTAGC ATTAGCGATG ATTCGGCAAC CATTACAGAA AACAGTGGTT CTGATGTTTC AGACTTGCAA ACCATTGACG TAAGTGGCGA TATAGAAATT GACGATCCCG ACACGCACGA TGATACCGTA ACGGTTACCT CTTCGTTGGA TAGCATTTCA TGGAGTGGAG GCGATACCAC AGATAGTGTT TTTGATACGT TAACCGATGG ATTTACTGCT GATGAAGATG GCTGGAGCTA CTCAGTAACC GATGGCGTTG ACCTCAACTT TATTGGCGAA GATGAAACCG TTGTGCTCAC CTACAACGTA ACGGCAAGCG ACGGCACTGA AAGCGATACC GATACCGTAA CCATTACCAT TGAAGGCACC AACGACACTC CAACCGTGGA TGTTGTAGAA ACCAGTATAA CCTTTGCAGA GGATGATACG CTAAGTGATA GTGGAACCGT AAGTTTTAGC GATCTCGACA CCAACGATGT CATTGATGTT ACAGAAAGCT ATAACAATGA TATTGCATGG AGCTATAGTG GAGGTACCTT AACTGATGAA ATGATTGGTG AGGATATTTC TACGTTAACC AATGGATTTA CTGCATGGGG AGAAGATTTG TCTTCAGATG AAACAGTATG GAATTATAGC GCAACCCTTG GAACTGATGA CCTCGATTTT CTTGATGCAG GTGAAACACT CACCTTTAGC TACACCGTAA CCGCTACCGA CAACAACGGT GCAAGTGCTA CCGATACCAT TACGGTTACT ATTACCGGTT CGAATGATAC ACCTCACTTC AACCAAGATT CTGTAGATAA CGGTTCAGTA ACAGATACAT CGGCAAGTGA CACATTCTCT AATGATATTA TTGGTACGCT TACAGCTGAT GATGTTGATC ACAACGATAC CATAACATAT GGCGTTGTTA ATGGCACTGG AACTTACGGT ACCTTAACCG TGGATTCTTC AACCGGCGTT TACCGTTATG ACGGTAATGA TAATACTATT AATGCGCTGA ATGCTGGTAC ATGGAGTGAT ACATTTACCG TTACTGCGAG CGACGGAACA ATAAGTGAAT CAGCTACTGT TGTTATTACC ATTCATGGAG CAAACGATAA TCCAACGGTA AGCATCAACG ATGATTCTTT AAGCTTTACC GAAGATGTTA GTGCCTCTGC ACAAGATTTA ACCGATAGTG GTTCTATTAC TTTTGACGAT GTTGATACAA GCGATAACGT TGATATTATT GCAACGTATA AAAACAATAT CTCATGGAGT GGAGGTACTT TAGCAAATCA AATGAGTGGT GAGGATAGCG GTAAATTAAC ATCAGGTTTC CACGCATCAG CAACCGACAG TACCTCTGAT AGTATAACTT GGGACTACAG TGCAACAGAT GTAGATCTTG ATTTTCTTGC TGAAGATGAA ACCATCACTC TTGGTTTTAC CATAACTGCA CGCGATAGCC ATAATGCCTT TGCTACTGAT GATGTAACCA TTACCATCAC TGGCACCAAC GATGATGTTG ATATTACTGG TGGTACTACG AGCGGTTCAG TAACAGAATT GGCTGACAAA TATAGTGAAA ATGGTGTTCT TGAAAATGAC TATCTCCATT CTATAACTGG TTCTATTGAT ATCTCTGATC CTGACGTTAA TGATAGCCAT ACAGCCACAT TTACGGATAA TAGTGAATCA GAACAAGTAA CCTATCTAGG TAGTTTTGAT GTTGCTGATA ATGGAGAAGA TTGGACGTTT ACCGTAAGCG ATGAGGATTT AGACTATTTA GACGATGATG ATGATCCTCT TATCCAAACT TATACCATAA CCATCTCTGA CGGGCACGGT TCAAGCGATA CGCAAGATGT TACCATTACC ATCCACGGTT CTGACGACAA CGCCTCCGTT GCAGGTCGTG TTTACTACTG GAGCAACTTC GATGACATTG ACGACGTAGC AACCGAAATG TACGCCCAAG ATTCAATGCA CACCGATGGA GAAGATAGTG GCATTGAGTT TAGAAATATC GAAAAACACG ACAACGGCAC CTACACGCTC GATATTTACA AAACAGCCGA TACCGATGAG GCTGACAGCT TCCTTATTAA GCTCCAGTTA GCAAAAGGCA GCGTTGCCAC ATGGGAACAA AGCCACGATC TTTTTGATGG CGAAGGTAAT GAACTACCGG ATCTTACTGA GTTTGGATTT GTTACCTATG CCAGTTCTCT ACGCACAGGC GAATGCAATA TCGGAGGTTA TAGCGCATCA CTACTGTCAT TACCGAACGA TCAAGAGGTT AAGCTTGGCA CGCTTACCAT TACAGCGCCA ATTTTTGATG CGAAACTGCT TTCGGGTAGT TACATAGGTG ATACTGCAAT TGATGCTGGT GATATCTTCT CAGAAATGAA ACTTAATGTT ACAGAAGGCG AAGATATTAC TTATTACAAT GGTGATGGAT TGTACGACTA CTTAAACCAA CTTAATTCAG GTGAAGACTC ATTCTATTAT TATGACTCCG TTGATCCTGA TGACTATAAC TTTGATGCCA TTAAAGAAGT TACGACTGAA GATGCTAATG AAGTAACTCC AGCAGATGCT TTATTAGCAT TAAAACTAAG TATGGGAATT AATACTGCAT TACCAGACTT AATTGCCTTA TTTGAAGAAT CAGACACTAT TCCATTAATA CCATATATGT ATATGGCAGC AGATGTGAAT AAAGATGGTG AAGTAACAAT TCAAGATGCC TTGAATATCT TAAAAATGTC TGTTAATTAT GCATGTGCTC CAGAGCAAGA GTGGATATTT TCACCATTAC CGCATAATGA ACAAAACATA TTGGAAAATA TGATGAATGG TTTTTATGTA ACCTATGTTA ATGATTTAGG TGAAGACGTT AAGGTGGATT GGCTTGATAT TAAAGGCATA AGTGGAGATG AAACTGGCAT TATTCTCTCT ATAGGTGATA ATGCGATACC AATTGAGGAA TGGAATATAG GGGTAGATTG GGAGCAGGCA TCTCCAGAGC TGCATGATAT AACTGTAACT GACAATGACC TACAATTTGT AGATCTTATT GGCATCCTCA AAGGCGACGT CAACGGCAGT TGGGGCGACC CAATTAATTT TAATCCACCC AATTAA
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Protein sequence | MSNTVVFIDS RISDVNALIS RFAVGTEYYV LDSERDGILQ ITEALAGKSG YSSLQIFSHG TAGSLMLGST VLNNAALSNY TAQLAAIGGA LTASGDILLY GCNVAAGDVG QQFIAALAEA TGADVAASDD LTGSAALGGD WDLEYATGAI ESGVDTNVVQ EYDGVLEPPT TTITITLPTE AEIRNNSNID QGYITESTLG SNVTLYLQDI LAVDTTNLLS TTAPTSFVIS VSYGKISFLK TKVDTIPIVS GNGSNTVTLT GTITQIRTLL TNNTISYVGN TGFSGIETLS AGISGVLANN SGNASGSANS ELSIVGINDA PTILDAKATL TVSEGSLLND VFEGSFTLSD PDIAHYIMQA DITVLHGTLK LSGDDLDSVT GNETKSVTIT GSRANIELAI TALQYTPDEN YNGSDTLTVT VNDLGTTNVN QGNPDEDKTD IHQVTISVVN HAPVLENDYT PILSEISEDI NSSITETEDG DNAGTLVKDI IPENDPTDSI TLDAITDEDV TSALQSIYIT AVDSTNGKWQ FKLDGQTTWS TITLTGDTAL LLSENNSLRF IPNNNWSGTA TFTFGAWDGT GRDINNNNAL YEAGDYVVIT QRGVLNAPFS LDVDTATITV NPVNDAPTFT AFSAPITPAI TTNQPSLALE DGGNTVGEPS TTPITITFDD LATKGNEADA NDAAYGGAVT AFVVKRVLSG TLTIDNTDYT AGTEDLNLTI SESQDASWTP ELNKNGILNA FTVVAKDNDT TDSKESTTPS VTVTINLTPV NDAPTVIPAT QSATLTAGSD DVTSAYISMA MSDVDTGDIV KVDGDWLADE SAANDGEEHW TSSDGGKTYT FDGSYGTATL YRVATTDGHS AGEVTYSFDY ADTDLDSLAA NATATDSFTI VVSDDAKVTA TADAVFTING ANDDPIITSG TQSGSVIENS SETATGDVNA TDIDYGTTLS YSGDATGDYG SLDVTEIDGT WTYTLTSNAL DDGESDIESF TITVSDGDGG SATQDVTITV WGDNDPPTIT ESAQSPDYVT EDGGINNGTA GTSSAHIDVT LSDADGGDTV SYVTTGWSGS GNTYTKTGTY GTATLHPNTH VIDYVLNNSD TDTQALDTND VVSDSFSITV TDGTDFTSET IAFTIHGTND APTIDVSDTG ESFTESDDAS MQTLSATGSI TFDDVDASDS VSLTFAESTD ISWSDSNGGG DYDNELDSDY SSVKAALLNG FSTTATGWSY STSGGSSLIG SEFGAIPSNY FLPPPFSFTS LITGVLGDQN DVTEGQFKYD VYTLSNVVSG TLVFAAIESS AFPEYANVYT SANLQLRQPI TPRIISNTTD GNARILAWFY LPGDTLWVGS DAPQQSGAYN LYLGGTIAES GDGVDLDFLD EDEQLTWSYT VSATDGTAST TSTESVSFTI TGENDAPTIS ISDDSATITE NSGSDVSDLQ TIDVSGDIEI DDPDTHDDTV TVTSSLDSIS WSGGDTTDSV FDTLTDGFTA DEDGWSYSVT DGVDLNFIGE DETVVLTYNV TASDGTESDT DTVTITIEGT NDTPTVDVVE TSITFAEDDT LSDSGTVSFS DLDTNDVIDV TESYNNDIAW SYSGGTLTDE MIGEDISTLT NGFTAWGEDL SSDETVWNYS ATLGTDDLDF LDAGETLTFS YTVTATDNNG ASATDTITVT ITGSNDTPHF NQDSVDNGSV TDTSASDTFS NDIIGTLTAD DVDHNDTITY GVVNGTGTYG TLTVDSSTGV YRYDGNDNTI NALNAGTWSD TFTVTASDGT ISESATVVIT IHGANDNPTV SINDDSLSFT EDVSASAQDL TDSGSITFDD VDTSDNVDII ATYKNNISWS GGTLANQMSG EDSGKLTSGF HASATDSTSD SITWDYSATD VDLDFLAEDE TITLGFTITA RDSHNAFATD DVTITITGTN DDVDITGGTT SGSVTELADK YSENGVLEND YLHSITGSID ISDPDVNDSH TATFTDNSES EQVTYLGSFD VADNGEDWTF TVSDEDLDYL DDDDDPLIQT YTITISDGHG SSDTQDVTIT IHGSDDNASV AGRVYYWSNF DDIDDVATEM YAQDSMHTDG EDSGIEFRNI EKHDNGTYTL DIYKTADTDE ADSFLIKLQL AKGSVATWEQ SHDLFDGEGN ELPDLTEFGF VTYASSLRTG ECNIGGYSAS LLSLPNDQEV KLGTLTITAP IFDAKLLSGS YIGDTAIDAG DIFSEMKLNV TEGEDITYYN GDGLYDYLNQ LNSGEDSFYY YDSVDPDDYN FDAIKEVTTE DANEVTPADA LLALKLSMGI NTALPDLIAL FEESDTIPLI PYMYMAADVN KDGEVTIQDA LNILKMSVNY ACAPEQEWIF SPLPHNEQNI LENMMNGFYV TYVNDLGEDV KVDWLDIKGI SGDETGIILS IGDNAIPIEE WNIGVDWEQA SPELHDITVT DNDLQFVDLI GILKGDVNGS WGDPINFNPP N
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