| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1169 |
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| Symbol | |
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| ID | 3747925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1563540 |
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| End bp | 1564874 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637773703 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_379474 |
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| Protein GI | 78189136 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAT TTTTCACTTT TTTACGCTAT GCCTTCATTG GTATTTTAAC GCTTTCCCTT
GTAACCCCTG AGGTTGTAGA TGCTGCTAAA AAATCCAAAA AGAAAAGCAG TAGCCGTAAA
AAATCATCCA AACGTAACGC ACGCGCTAAA AAAGGCTCGA ATAAAAAAAC ATCAGCGCGG
CAAGCTCGTT TACGCGTGGT TGATGGGGTA GAAACGGAAC GAAATTCCAT AAATCTTACT
GCCTCGCCAT CAAGTGCTTC GCGTCAGCTC AATAAGCGAG CAATGGGATT TTATGAGCAA
GGGCGTTATG CTGAAGCTGA GCCACTCTAT CGAGAATTAC TTACTCTTGA TGAAAAACAG
TTAGGCAGTC GCCATCCCGA AGTTGCAGTT ACCTTAAACA ACCTTGCTTC ACTCTTGCAG
CAACAAGGGC GATATAACGA AGCCGAGCCA CTCTATCGCC GTGCGCTCTC TATTCGCGAA
GAAAATTTTG GGGCTGACGA TGCAAGTGTA GCGCAAAGCT TAAACAATCT TGGCTCGCTC
TTGCAAGATC AAGGACGTTA CTATGAAGCA CGTCAGCTTT ATAGCCGCTC ACTTGCAATT
GATGAAAAAG TGTTGGGAAC CGACCATCCC GATGTTGCCG CCGACCTCAA CAACCTTGCC
TCACTACTAC AAGCACAAGG GCGTTATGCC GAAGCTGAGC CGCTCTATCG CCGTTCCTTA
GCCATTCGTG AGCAACGATT TGGTGCAGAG CATACGCTGG TTGCTATGAG CCTCAATAAT
CTTGGCGTGC TCTTGCAAGC ACAAGGGCGT TATAGTGAAG CCGAGCCACT CTATCGCCGC
TCGCTTGCCA TTCGTGAGGC TCAATACCCC GCCAACAACC ACTCAATTGT TGCAACAAGT
CTCAATAATC TTGCCTCCCT TTTGCAGGCA CGAGGAAAAC TTACTGAAGC TGAACCCATT
TATCAGCGCG CATTGTCCAT CAACGAACAA ACCTTAGGTG AAAACCACCC ATCAGTTGCA
ACAAGCCTCA ATAATCTTGC TGGGTTGCTT AGGGCACAAG GGCGATATGC CGATGCTGAA
CCTCTTTACC GCCGCTCGTT AACAATACGT GAAGAACAGC TTGGCGAAAA CCACCCCGAT
GTTGCTATGA GCCTCAATAA TCTTGGAGTG CTCTTGCAAG CACAAGGGCG TGCCAGCGAA
GCCGAACCAC TCTATCGCCG AGCATTACTG ATTGATGAAA AAGTATTAGG AGCTACGCAC
CCACAAACAA TCCGTTTACG CAATAATCTG AATGCTTTAC TGAATCCATC AGCAATACCA
CTAACCACCC AATAA
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| Protein sequence | MKPFFTFLRY AFIGILTLSL VTPEVVDAAK KSKKKSSSRK KSSKRNARAK KGSNKKTSAR
QARLRVVDGV ETERNSINLT ASPSSASRQL NKRAMGFYEQ GRYAEAEPLY RELLTLDEKQ
LGSRHPEVAV TLNNLASLLQ QQGRYNEAEP LYRRALSIRE ENFGADDASV AQSLNNLGSL
LQDQGRYYEA RQLYSRSLAI DEKVLGTDHP DVAADLNNLA SLLQAQGRYA EAEPLYRRSL
AIREQRFGAE HTLVAMSLNN LGVLLQAQGR YSEAEPLYRR SLAIREAQYP ANNHSIVATS
LNNLASLLQA RGKLTEAEPI YQRALSINEQ TLGENHPSVA TSLNNLAGLL RAQGRYADAE
PLYRRSLTIR EEQLGENHPD VAMSLNNLGV LLQAQGRASE AEPLYRRALL IDEKVLGATH
PQTIRLRNNL NALLNPSAIP LTTQ
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