Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1111 |
Symbol | |
ID | 3748329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1499073 |
End bp | 1499873 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637773642 |
Product | hypothetical protein |
Protein accession | YP_379416 |
Protein GI | 78189078 |
COG category | [R] General function prediction only |
COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGATCATA CAAAAATAAA CCTTCTTGTT CGGCTTCAGT ATTTGGATAA TCAAATTGAA AATATTGTAA GCCTTCAAAA AGGATTGCCT GAAGAAATTG AAGCTCTTGA AGATGATCTG GCATTTACAA CTCGTCAGAT TGAGTCGCGC AAAAAAATTG CTGATGAGCA ATTACGCCAA CGTACTCGCT TGAATGAGCA AATTAATGAA TGCAACAATA AAATCAATTC GTTTAAAGAA AAGCAAACGC TGGCGCGCAA CAACAAAGAG TATGATGCTC TTTCGAAGCA AATTGAGTAC GAAGAAAAGG AAATTGCAAA TGCAAATATG CAATTGCAAG ATATAGCACA AACCACTCAG CGTCTGCAAG AGTTGCAGAA AAAAGGGGCA CAACTTATTA CGGAAAATCG TTACGATGAA ATTACCGAAG AGATGATGCC CGATGATGTA CTGCTACAAC AACTGAAAGA TTTGACGGCA CAAGTTGCAC AAAAACGCGA AGAGCTTGAG AGTATTGTTA TTGAAACGGC GGCTGATGTG GCAACATTAG AGGAAAAGGT TGTAGCGCAA CGCGCACTCA TTACCAAAGA GGCAAAGCGT TTGATTGATA AATACGATCA CCTACGGAGC GGCACTTTGC GCAATGCTGT GGTTAAGTTG AATCGCAATG CTTGCTCAGG TTGCAATACA CGAGTACCAA CCAATCGCCA CACCATGATT GTACAAGGTG GTTTTTACCT TTGTGAATCG TGTGGACGCA TTGTGGTGCA TGAACGATTA TTTGAAGAAG CAAAAGATTA A
|
Protein sequence | MDHTKINLLV RLQYLDNQIE NIVSLQKGLP EEIEALEDDL AFTTRQIESR KKIADEQLRQ RTRLNEQINE CNNKINSFKE KQTLARNNKE YDALSKQIEY EEKEIANANM QLQDIAQTTQ RLQELQKKGA QLITENRYDE ITEEMMPDDV LLQQLKDLTA QVAQKREELE SIVIETAADV ATLEEKVVAQ RALITKEAKR LIDKYDHLRS GTLRNAVVKL NRNACSGCNT RVPTNRHTMI VQGGFYLCES CGRIVVHERL FEEAKD
|
| |