| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1078 |
|---|
| Symbol | |
|---|
| ID | 3746732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1459621 |
|---|
| End bp | 1459869 |
|---|
| Gene Length | 249 bp |
|---|
| Protein Length | 82 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637773609 |
|---|
| Product | AbrB family transcriptional regulator |
|---|
| Protein accession | YP_379383 |
|---|
| Protein GI | 78189045 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.532244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATTA CAACCATGAC AAGCAAAGGA CAAGTCACCA TTCCGAAAGA GATTCGGGAT
CTCCTTGAAC TGCACTCTGG CGACAGGCTT GAGTTTACTT TTGAAAAATG GGGCAGACTT
GTTGTTTCTC CAGTGAAAAA AAATGTTGAT GATCTTTTCG GCAGGTTGTT TGACCCTACA
AGAAAAGCTT TCTCAACCGA GGCGATTAAT GATGCACTTC GTCAAAAATT CCAACATGAC
GAGCAGTGA
|
|---|
| Protein sequence | MPITTMTSKG QVTIPKEIRD LLELHSGDRL EFTFEKWGRL VVSPVKKNVD DLFGRLFDPT
RKAFSTEAIN DALRQKFQHD EQ
|
|---|
| |