Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0936 |
Symbol | |
ID | 3747089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1272299 |
End bp | 1273675 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637773466 |
Product | MFS transporter family protein |
Protein accession | YP_379242 |
Protein GI | 78188904 |
COG category | [R] General function prediction only |
COG ID | [COG2270] Permeases of the major facilitator superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCGTG CTTTTCGTGC TTTTACCCTT CGCCGTAAGC GCTTGCAAGC TCAGCGCAAC TATCAAATCC TTTTTTGGCT CCTCTTCGAT TTTGCCAACA CCGCTTTTAG CGTGATGATG GTAACGTTTG TTTTTCCCCT TTATTTTAAA AATGTGATTT GCTCGGCGCA GCCTTATGGC GATGCGTTAT GGGGATTGAG CATTAGTGTT TCCATGTTGC TTGTTGCACT TGTCTCGCCC TTTCTTGGAG CTGCGGCTGA TGTATTGGGC AGGCGCAAAC ATTTTTTGCT AATGTTTACG CTTGCAGCGG TAGTGGGAAC CGCACTACTT TCGCTAACAG GAGCGGGGAT GGCAACCGTT GCAGTGGGGC TTTTTATTAT GGCAAATATG GGTTTTGAAG GGGGAATTGT TTTTTACGAT GCTTATCTCA AAGAGTTGGC TTCGGAGCGA AGCGTTGGGC GATTATCGGG CTACGGTTTT GCTATGGGTT ACCTTGGTGC GCTCTCCATT TTGCTGCTTG TTTCGCCGTT GCTTGCTGAT GGCATTAACG TTGCCAATGC CGCTAAGGTG CAGCAGAGTT TTCTTGTAGC GGCTACCTTT TTTGCACTCT TTGCAGCTCC ACTCTTTTTT GTGATTCGCG ACCGCCGATC TCTATCAACC TCACCTCATC CATCCACCAA AAAAATTCTC TCCACAGCAA CATCCGTAAA AAACGTAGTA GTTGCCACGC ACCACGTAGA ACGAAAGATT TTTGGGCAAG GGGCGTGGCG CAATCTCCTG CAAACAGTGC AACATATTCG CCGCTATCCC GACCTTGCAC GCTTTTTACT TGCTTGCTTT TTTTATAACG ATGCCATTTT AACCGTTATT GCTTTTGCCT CGCTTTATGC CGAACAAACG CTTGGCTTTT CAAGCCGTGA GTTGATGCAC TTTTTTATGG TGGTGCAAAT TGCTGCAATG GTGGGTGCGC TTTTTATTGG CTTTATTGCC GATACCATTG GTGCAAAGCG AGCACTTGTT GTAACTCTCA TACTTTGGAT TGGCGTTATT GCGGCTGCAC TCTTTGCTGA AAGCAAGGAG TTATTCTTTT ACACGGGAAT GCTTGCGGGC ATAAGCATGG GTTCCTCACA AGCGGCATCG CGCTCTATGA TGACGCGCTT AACGCCGCAA GAGCATGTTA CAGAGTTTTT TGGCTTTTAC GACGGAACCT TTGGCAAAGC ATCGGCTATT GTGGGTCCTT TTCTGTTTGG GGTGATCTCT TCACAAGCGG GGAGCCAAAA AGTTGCGCTG TCATCACTCC TAATTTTTTT TGCTATAGGA TTAGTGCTCC TTACCAAAGT GAAATCCTCC TCAACCAATG TGCCGTCATT ACAGTAA
|
Protein sequence | MQRAFRAFTL RRKRLQAQRN YQILFWLLFD FANTAFSVMM VTFVFPLYFK NVICSAQPYG DALWGLSISV SMLLVALVSP FLGAAADVLG RRKHFLLMFT LAAVVGTALL SLTGAGMATV AVGLFIMANM GFEGGIVFYD AYLKELASER SVGRLSGYGF AMGYLGALSI LLLVSPLLAD GINVANAAKV QQSFLVAATF FALFAAPLFF VIRDRRSLST SPHPSTKKIL STATSVKNVV VATHHVERKI FGQGAWRNLL QTVQHIRRYP DLARFLLACF FYNDAILTVI AFASLYAEQT LGFSSRELMH FFMVVQIAAM VGALFIGFIA DTIGAKRALV VTLILWIGVI AAALFAESKE LFFYTGMLAG ISMGSSQAAS RSMMTRLTPQ EHVTEFFGFY DGTFGKASAI VGPFLFGVIS SQAGSQKVAL SSLLIFFAIG LVLLTKVKSS STNVPSLQ
|
| |