| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0732 |
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| Symbol | |
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| ID | 3747428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1009651 |
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| End bp | 1011771 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637773266 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_379046 |
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| Protein GI | 78188708 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAC CGTCATCATC GTCTCAAGTC ATTCCACTAC AGGTGCGCCA ACTTTTTGAT
CATGCGCGTC AGTTACGTAA GCAAGGGATG CTTAACGAAG CTATTGAGGC TTTTCGCGAA
GTAATAGAGC TTCAGCCTGA TTACGTTGCA GCTTACAATA ATCTTGCTAA TGCGTTGCAA
GCGCAAGGCG ATAGTGATGG TGCTGAAGCT GTTTATCAGC AAGCGCTGCA TTATGCGCCA
ATGCTACCGG TGCTGCATTG CAATTATGGA AGTTTGTTGC TTGCGCGTCA AGAGTATGAT
GCTGCTATCA AATCGTATCA AAAAGCGCTA ACGCTTCAAG CTGATTTTTT TCTTGCGTAC
ACAAATTTAG CAAAAGCGTA TAGTGTTCGT GGAAATTTTT TTGCGGCACT TCAAACATAC
AAAGCAGCTT TACGCCTTAA GCCTCAAGAT GCTGAACTCT ACCTTGATTG TGGGCAGTTA
TATCAGCAAT ACGGCTTTAT TCCGCAAGCA GTAAAATATT ATCGTCGTTC ACTGCAACTT
GCCGCGTCAG CGCGTGGCTA TAATGCACTT GGTGCGGCTT TGCAGGATTG GGGCAACTTA
AAACTTGCGC GTGCAAGTTA TCATCGAGCA CTTAAGCTGC AACCTGATTT TGATCTTCCA
CAATATAATT TAGCGCAACT TTACGAGAAT CTGGGTGAGT TAGAGACGGC GCGTCGTTAT
TATGAGCAAA CGCTTACGGT TGATGCTGAG AATGCCAAAT TGCTTTTGCA CCTTGAAATG
ATTAAGCGTC GTCAAGCTGA TTGGAGCAAT TACACAGAGC GAGTTGAGCA ACTTCGCCAT
GCACTTGAGC GTCATGTAGA AAACGATAAA GGTGAAGCGG TACCAATGCT TAGTGTACTC
TCTTCGTCAT TATCTCCAGC TCTCTACCGT GCTCTTGCTG AGCAAATGGC ACGGCAGTTA
ACGCGCAATG CGCAAGCCTT GAATGCTACC TTTACCTTCC CAAATAATGT TGCACCTGAG
CGCTTAAAAA TTGGGTATCT CTCGCCTGAT TTTCGAGGTC ATGCGGTTGG TACGCTGATA
GCTGATCTTT TTCAATATCA TGAGCGACCT GATTTTGAAG TTTTTGCATA CAGCCTTCTT
CCTCATCACG ATGAGTGGAC TGAGCGCGTA AAAGCAGGAT GCGACCATTT TATTGATGTA
TCGCATAAAT CGCCACTTGC TATAGCTCAG CAAATTCATG CTGATGGTAT TCATATTTTG
GTGGATTTAG CAGGTTATAC CAGCTATGCA CGTCCATTGG TTTTGGCATT AAAACCAGCA
CCGATACAAC TCCAATATCT TGGTTACCCT GGTACGCTTG GTGCTGAGTA TGTTCCAACC
ATTATTGCCG ATAAGCATCT CATTCCCGAA AACCATCAAT CGTACTACAC CGAACAGCTC
TGTTTGTTGC CACATGCGTG GGTAGCAGCT CCCATGCAGA TTGCATCACT ATCGCTTACT
CGTGCGGAGT TTGGTTTGCC AGAGAAAGGC ATGGTCTATT GTTGCTTTAA CGGCGTGTAT
AAACTTGAGC CACATGTTTT CTCTCTTTGG ATGGAAATTT TAAGTAAAGT GCCCAATAGT
GTGCTGTGGC TTATTGATGG AGAGGAAAGC GGCAGCAACG AGCGATTGCG TGCAGTAGCA
CAAGAGGCTG GTATTGCGCC TGAAAGGCTT GTTTTTGCTA AAAAACGTTC ACATGAAGAG
TACTTAGCGT TGTATCGGCT TGCCGATCTT TTTCTTGATA CGCTCAGTTA CAATGCAGGT
GCTACAGCCG TTGGGGCATT TTCTGCGGGT TTACCGTTGC TTACTTGCCA AGGCGAGCAT
TATGCTACTC GTATGGGTAG TGCTTTATGT TATGCTGTTG GTTTGCCTGA ATTAGTAGCT
CCAACGCCTG CTGATTATGT AGAGTTTGCT GTACAACTTG GTTCTTCGCC TAAAAAGAGA
GCTGCGCTAA AACGCAAGCT TGCTAAAAAG TTACCCACAG CACCGCTTTT TCAGCCACAG
CAATTTGTTG TAGCCTTAGA GCAGCAGTAT CGTTCGTTGT GGAACAACTA TTGCGAATTG
ACAAATAACA TGTTGGGGTG A
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| Protein sequence | MNPPSSSSQV IPLQVRQLFD HARQLRKQGM LNEAIEAFRE VIELQPDYVA AYNNLANALQ
AQGDSDGAEA VYQQALHYAP MLPVLHCNYG SLLLARQEYD AAIKSYQKAL TLQADFFLAY
TNLAKAYSVR GNFFAALQTY KAALRLKPQD AELYLDCGQL YQQYGFIPQA VKYYRRSLQL
AASARGYNAL GAALQDWGNL KLARASYHRA LKLQPDFDLP QYNLAQLYEN LGELETARRY
YEQTLTVDAE NAKLLLHLEM IKRRQADWSN YTERVEQLRH ALERHVENDK GEAVPMLSVL
SSSLSPALYR ALAEQMARQL TRNAQALNAT FTFPNNVAPE RLKIGYLSPD FRGHAVGTLI
ADLFQYHERP DFEVFAYSLL PHHDEWTERV KAGCDHFIDV SHKSPLAIAQ QIHADGIHIL
VDLAGYTSYA RPLVLALKPA PIQLQYLGYP GTLGAEYVPT IIADKHLIPE NHQSYYTEQL
CLLPHAWVAA PMQIASLSLT RAEFGLPEKG MVYCCFNGVY KLEPHVFSLW MEILSKVPNS
VLWLIDGEES GSNERLRAVA QEAGIAPERL VFAKKRSHEE YLALYRLADL FLDTLSYNAG
ATAVGAFSAG LPLLTCQGEH YATRMGSALC YAVGLPELVA PTPADYVEFA VQLGSSPKKR
AALKRKLAKK LPTAPLFQPQ QFVVALEQQY RSLWNNYCEL TNNMLG
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