| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0355 |
|---|
| Symbol | rplJ |
|---|
| ID | 3748038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 401726 |
|---|
| End bp | 402244 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637772883 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_378671 |
|---|
| Protein GI | 78188333 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000413063 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAG ATACAAAACA ACAGATTGTT CAAGAAGTTG CTGAAAAAAT CAGCCAAGCG
CAAGGCATTT ATCTTACTGA ATTTCAAGGG TTAACCGTTG AAAAAATGTC GGAGCTTCGC
GGCGAGTTTC GTAAAGCTGG CGTTGAATAT CGTGTTGTAA AGAATACCCT TATTCGTAAA
GCGTTGCAAG ATATGGCTGG TGCCGATAAG CTTGCTCCTG CATTAAAAAG CACAACAGCA
ATTGCTTTTG GTATTGATGA TCCTGTTGCA CCTGCAAAGG TTATTAAAAA ATTCAGCAAA
GCAAATGATC AGTTGAAATT TAAAATGGCA GCCATAGATG GTGCTGTTTA TGGTGCTGAT
CAGCTAACGC TGCTTTCTGA AATGCTCAGT AAAACCGAAA ACATTGGACG CACGGCTGGG
CTGATCAACA ATGTGATTGG CTCTGTGCCA ATGGTGGTTA ATGCTGTTAT GCGCAATATG
GTTTGTGCAC TCGACCAAAT TGCCAAGCAA AAACAGTAA
|
|---|
| Protein sequence | MKRDTKQQIV QEVAEKISQA QGIYLTEFQG LTVEKMSELR GEFRKAGVEY RVVKNTLIRK
ALQDMAGADK LAPALKSTTA IAFGIDDPVA PAKVIKKFSK ANDQLKFKMA AIDGAVYGAD
QLTLLSEMLS KTENIGRTAG LINNVIGSVP MVVNAVMRNM VCALDQIAKQ KQ
|
|---|
| |