Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0335 |
Symbol | |
ID | 3748055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 375680 |
End bp | 376990 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637772862 |
Product | FusA/NodT family protein |
Protein accession | YP_378651 |
Protein GI | 78188313 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.73563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAA AAAATTTTAT AAAGCAGGTT CAGATTTTTA GCATGAAACA ATATATCGCA TCAACCTTAC TGCTTTTTCT GCTTATAGGT AATGCGCCAT CGGTATATGC CGAAGTGCTT TCGTGGGAGC AGTGCGTGGC TGAAGCGCGT CGTGCCCATC CATCATTAGT TCAAGCAAAT GCCATCGTGC AGCAAGCATC GGCAAATCGG CGCATTGTTG GCTCGTCGCG TTTACCAAAC GTTGCATTGG CATTAAACGC GCAGCAGCAG GGGAGTAGTG ATGGCACAAG CACCGACCAC ATTGGTTCAT CGCTTTCCCT CCATCAATTG CTTTATGATG GTTCAAAAAC TTCCAAGCAA CTTTCGGGCG CTGATGAGGC GTTGCGTGCT GCCGAAGCTG CCGCACAGCT TACCAATGCG GAAGTGCGTT ACCAATTGCG CAGTGCATTT GTGGCGTTGC TCAAAGCGCA AGAATTGGTA GAGTTAACCA ATGAAATTGC CGAGCGTCGG CAAAAAAATC TTCGCCTTAT TCGTTTACGT TATAATGGGG GCAGGGAGCA TATTGGGTCG CTCCGTCAAG CGGAAGCTGA TGTGGCTGAG GCTACCTTTG AGGTTGAGCA AGCAAAACGT GAGCTTACTT TAGCGCAGCG CCATCTTGCG CTTGCGTTGG GGCGTCAAAA GTCGGTTGCA CTGCGCGTTC AAGGTTCCTT GCAAGCAGCA CCATTTTCCC TTAAAAAACC TGATATTGAG CAGCTCCTTA CCATTCATCC CGCTACGCAG CAAGCGGCAG CGCAAAGCCG TGCGGCTCGT TATGAGCTTG AGGCATCGCG CTCTGCTTTT TCGCCAACTC TTGCGCTGAC CTCATCGCTT GGGCGCACCG CAGCCTCCTA TTTTCCTCTT GAAAGTGTTG ATTGGCAGGC AGGGCTTTCG CTTGCTGTGC CTATTTATAG CGGTGGTGAA GGCAAGGCGC GTGTAGCAAA AGCGCGTGCT TATGCGCTGG AGCAGCAAGC GGCAGCTCAA GCAAAAGTGT TGCAGGTTAC GGGAGCGCTG GAAGCGGCTT GGACGCGCTT GCAGGATGCC GAGCAAGCTA TTGCGGTGCG TCGCCGTTTT GTGGAGGCTG CAAATGAGCG TGCTACCATT GCAAGTGCGC AATACTCCAA CGGCTTGCTT GGTTTTAATG AATGGATGAT AATTGAGGAT AATTTGGTGA ATGCAAAAAA ACGATTGCTT GAAGCGAGCG CAGCGCTTTT TGTTGCCGAA GCGCAATGGC TTGAAGCGCA GGGAGGAGGT TTGAATGAAG CAGAAAAGTA A
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Protein sequence | MTTKNFIKQV QIFSMKQYIA STLLLFLLIG NAPSVYAEVL SWEQCVAEAR RAHPSLVQAN AIVQQASANR RIVGSSRLPN VALALNAQQQ GSSDGTSTDH IGSSLSLHQL LYDGSKTSKQ LSGADEALRA AEAAAQLTNA EVRYQLRSAF VALLKAQELV ELTNEIAERR QKNLRLIRLR YNGGREHIGS LRQAEADVAE ATFEVEQAKR ELTLAQRHLA LALGRQKSVA LRVQGSLQAA PFSLKKPDIE QLLTIHPATQ QAAAQSRAAR YELEASRSAF SPTLALTSSL GRTAASYFPL ESVDWQAGLS LAVPIYSGGE GKARVAKARA YALEQQAAAQ AKVLQVTGAL EAAWTRLQDA EQAIAVRRRF VEAANERATI ASAQYSNGLL GFNEWMIIED NLVNAKKRLL EASAALFVAE AQWLEAQGGG LNEAEK
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