| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0321 |
|---|
| Symbol | xseA |
|---|
| ID | 3748116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 356170 |
|---|
| End bp | 357393 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637772848 |
|---|
| Product | exodeoxyribonuclease VII large subunit |
|---|
| Protein accession | YP_378637 |
|---|
| Protein GI | 78188299 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1570] Exonuclease VII, large subunit |
|---|
| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.568977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCAA TCAATGCAAT GGATGCACTT TCCGTTACCG AACTAACGGC TCACATTAAA
AGTGAACTGG AATCATTATT CCCCTTTGTT CGCGTAAGAG GTGAAATTTC AAACTGTAAG
CAACATAGTT CAGGACATAT TTATCTCACG CTTAAAGATA GTGGCGCACA ATTACCAGCG
GTTATTTGGA AAAGCACCGC TTCACTCTTA AGCATACGCC CAAAAGATGG CATGGAGGTT
GTTGCCGAGG GGCGCTTAGA GCTTTATCCA CCTTCGGGGC GCTACCAGCT TATTTGCCGC
CATGTAGCTC AAGCGGGAGT AGGGGCATTG CAGCAAGCCT TTGCGGAGTT GGTGCAAAAA
CTTGCCGCTT TGGGCTATTT CGACGAGAAT CGAAAAAAAA CCTTGCCGAC GATACCAACT
ACCATTGGCA TCATTACTTC GCCTACAGGC GCCGTTATTG AAGATATGAG TAAAGTGCTC
GCTCGCCGTT TTCCAGCAGC TCGCATAGCG CTCTATCCCG TTAAAGTGCA AGGCGCAGGT
GCGGCAGAAG AAATTGCACA AGCGTTAGAT TTTTTTAACC ACACCAAAAA GAAGCAATGG
AAACCTCAGG TGATTATTGT GGCGCGAGGT GGTGGCTCAT TAGAGGATTT GCAACCCTTT
AACGAAGAAA TTATGGCACA CGCCATTTAC CGCTCAGCAA TTCCAGTGAT AAGCGCGGTG
GGGCATGAAA CCGATATTAC CATTGCCGAC ATGGTGGCAG ATGTGCGTGC AGGCACTCCC
TCCATTGCTG CCGAGTTAGT AGTACCCGAT AGCGCACAAG TGCTTCGCGA TGTTGAGCAA
ATGGTTGCAT ATGCCCAACA GATACTTAAT AATAAGATAG AGGGGGCTGA ACGGGAATTG
CATTCGTTGT GCAACAGCTA CGCCTTTAAT CGTCCAATAC TAAAAATGCA GCAATGCTAT
GAGAACCTTG ATCGCTTTGA GGCAAGCATG ATGCGCAGTG TGGAAACTAC CTATCGTCAG
CAAATACAGC GTTGCACAGC CTCTATTCAG CAGCTTAATT TGTTGGATTA CCACAAAACG
CTTGAGCGAG GTTATGCGCT TATTAAAAAG AATGGAAGAT TTGTTACTTC AGCAAAAGCT
TTGCAACCAA ATGACACCAT TGAGTTACTC TTACACGATG GAGTGCGCAA AGCCTCAGTT
AAGCCTCCTG ATGCCTTTGC TTAA
|
|---|
| Protein sequence | MEAINAMDAL SVTELTAHIK SELESLFPFV RVRGEISNCK QHSSGHIYLT LKDSGAQLPA
VIWKSTASLL SIRPKDGMEV VAEGRLELYP PSGRYQLICR HVAQAGVGAL QQAFAELVQK
LAALGYFDEN RKKTLPTIPT TIGIITSPTG AVIEDMSKVL ARRFPAARIA LYPVKVQGAG
AAEEIAQALD FFNHTKKKQW KPQVIIVARG GGSLEDLQPF NEEIMAHAIY RSAIPVISAV
GHETDITIAD MVADVRAGTP SIAAELVVPD SAQVLRDVEQ MVAYAQQILN NKIEGAEREL
HSLCNSYAFN RPILKMQQCY ENLDRFEASM MRSVETTYRQ QIQRCTASIQ QLNLLDYHKT
LERGYALIKK NGRFVTSAKA LQPNDTIELL LHDGVRKASV KPPDAFA
|
|---|
| |