Gene Cag_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_0172 
Symbol 
ID3747698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp192870 
End bp193304 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content43% 
IMG OID637772699 
Producthypothetical protein 
Protein accessionYP_378493 
Protein GI78188155 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAC AACGACGACA ATTTGAAATT ATTCAAGAGC AAGCATTTCG CGAATTGCCG 
TATGAATGCT GCGGCTTGTT AGTTGGCAAG CAACAAAAAG ATCATCGAGG CAATATTGAA
AACATTGTTT ATGAAGTAGC ACCTTGCCAA AACTGCCTCT ATTACGGGCG CGAAAGCGGC
TTTGAAATTG CTCATCATGA ATATCTTGCC GTAGAAGCTG AGGCAAAACA ACATGGGTAT
CAAATTGTTG GCTCTTACCA TTCACACATC AATTCGCCAG CAGTCCCTTC ATTGCACGAT
GTTGATTTTG CCTTAAAAGG GCACTCTCTA CTTATTATTG CTATGATATA CGGGCAACCA
AAAGAAGTTA CGGCATGGCT GCGCCACCAT TCAGGAAGCG GTGTGAATCA AGAACAGATT
CGGGTGATTG AGTGA
 
Protein sequence
MRIQRRQFEI IQEQAFRELP YECCGLLVGK QQKDHRGNIE NIVYEVAPCQ NCLYYGRESG 
FEIAHHEYLA VEAEAKQHGY QIVGSYHSHI NSPAVPSLHD VDFALKGHSL LIIAMIYGQP
KEVTAWLRHH SGSGVNQEQI RVIE