Gene Syncc9902_2278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2278 
Symbol 
ID3743770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2187582 
End bp2188421 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content53% 
IMG OID637772478 
Producthypothetical protein 
Protein accessionYP_378279 
Protein GI78185845 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTCA CGATCGTCGG TTGTGGCTTT GTCGGTCTCG CCCTGGCGCG CCAACTTCAA 
GCTGAGCGAT CGCAACTCAC CCTCACTCTC ACCACAACAA GGGAAGAGCG ATACGCGGAA
TTACAACCTC TTGCTGATCA AGTGAAGATC TGCGATGCCG CTGATCCAAT CTCCCTCAAA
CAAGCCTTAT CCGACGCAGA GATCGCTGTG TTCTGCCTTG GGCCTAAGGG GGATCGTCAA
GTGGATGAAG ATGGCTATCG AAACACCTTT ATCGACAGCT TCCAATGCCT AACGAGCTTG
CTCCCGCAAC TCCCACAACT GCGTCAAATC ATTTATACGA GTAGCTGTTC GGTCTATGGC
GACGCACAGG GAGAGTGGGT CAGTGAATCA ACGCCGACTA ACCCCGGCAA TGGTCATGGC
GCTGTGTTGG TAGACAGTGA ATCTCTGCTC CAAGCGATCC ATCAACCATC TCGTCTGGTC
TGCATTCTTC GCCTTGGCGC TCTGCACGGT CCAGGTCGTG AATTCAAAGA CCGCTTTCAA
AACCTCGCCG GACAGACACG GCCTGGACGT GGGCAACAAT TCACCAATTG GGTCCACGTC
GATGATGTAG CAGGTGCCAT CAAGGCTGCA ATGACCGAGA TGTGGAGTGG TGTCATCAAT
GTCGTCAACG ATCAACCGAT CCGCATAGCG GATCTAATCG ACAGAACCCT CTCAAGCGAA
GGACTCGAAC CGATTCGATG GGGTGATGAT CCCAAAACCG CAAGCAGTGG TCGTCGCGTT
CGAAATACTC GTCTCCATGC ACTCGGCTAC GTCCTCAAGC ATCCAAAAGC GACGTTTTAA
 
Protein sequence
MHLTIVGCGF VGLALARQLQ AERSQLTLTL TTTREERYAE LQPLADQVKI CDAADPISLK 
QALSDAEIAV FCLGPKGDRQ VDEDGYRNTF IDSFQCLTSL LPQLPQLRQI IYTSSCSVYG
DAQGEWVSES TPTNPGNGHG AVLVDSESLL QAIHQPSRLV CILRLGALHG PGREFKDRFQ
NLAGQTRPGR GQQFTNWVHV DDVAGAIKAA MTEMWSGVIN VVNDQPIRIA DLIDRTLSSE
GLEPIRWGDD PKTASSGRRV RNTRLHALGY VLKHPKATF