Gene Syncc9902_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2240 
Symbol 
ID3743492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2148870 
End bp2149682 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content61% 
IMG OID637772440 
Productaminotransferase class IV 
Protein accessionYP_378241 
Protein GI78185807 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTGA CAATTGCCTG GATCGACGGA TGCTGGGGGG AGCCCGACGA CCTGCAACTT 
CCGCTGAGTG ATCGAGGCCT GCAACTGGCG GATGGCCTCT TCGAAACCGT GCTGGTCCGC
AACGGCCAGC CACAACTTCT GCAGGAGCAC CTGCTGCGAT GGAGCGACAG TGCTGCGCTG
CTGGGCATGG ACGTGCCTCC ACAAAGGTCG ACATTGCAGC CGCTCATCCT TGCTGCCATC
CAACGCTGCG CTCTCGCTCA AAGCGACGGT GCCCTTCGCC TCAACTGGAG CCGTGGCAGC
TCACCCCAGC GCGGAATCGG GCTTCCGGCC TCAGGACACC ACCGCTTTTG GTTCACACTT
CAGCCCTGTA CGCCGACGTT TTCACCCGTC AACACCATCA CTAGTAGCCA TGAGCGCCGC
AATGCCTCCA GCCGACTGAG CCATTGCAAA ACATTCGCCT ACGGACAAGC CATCCAAGCC
CGCAGGGAAG CGCAGAAGCA AGGGGCTGAC GATGCTCTGC TCTTGAACAC AGCAGGGGCC
CTGTGCTGTG GAACGGCAGC CAACCTGTTG ATCCGACGTC GCGGACAGTG GATCACGCCA
GCACTCAGCA GCGGCTGTCT TCCGGGCGTG ATGCGGGGCC GCGCTCTGAG CCAGGGCCTT
GCCGTGGAAA CCGAGCTGGA GGCCGAGTTC CAGGCAAATG ATCAGGCCGT TCTGATCAAC
AGCCTCAGCT GTCGACCAAT CGCATCCCAC AACGGCAAAC CCATGGCTTC AATGACTAGT
GCATTGGAGG TATGGCAATC CCTGCTCCAC TGA
 
Protein sequence
MPVTIAWIDG CWGEPDDLQL PLSDRGLQLA DGLFETVLVR NGQPQLLQEH LLRWSDSAAL 
LGMDVPPQRS TLQPLILAAI QRCALAQSDG ALRLNWSRGS SPQRGIGLPA SGHHRFWFTL
QPCTPTFSPV NTITSSHERR NASSRLSHCK TFAYGQAIQA RREAQKQGAD DALLLNTAGA
LCCGTAANLL IRRRGQWITP ALSSGCLPGV MRGRALSQGL AVETELEAEF QANDQAVLIN
SLSCRPIASH NGKPMASMTS ALEVWQSLLH