Gene Syncc9902_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2216 
Symbol 
ID3742219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp2128236 
End bp2128886 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content52% 
IMG OID637772415 
Producthypothetical protein 
Protein accessionYP_378217 
Protein GI78185783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0991364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTCA TTGCTCGTTA TCAGAACGCT GGCTTTGAAG CGGTCGCTGA TGGCGTGATG 
GCATTTTTCG ATCGCCGTAC GGATCTGCAA CGGCCTGGGG TGGCCTTTGG TTCTGGGGGT 
GGAGAGGAAC CAGACAAAGT GTCGACGGAT ATCAGTTTGG TGGCCATTGA TAAAACTGAT 
CTCGATGCTT TTGCCTTATC CGATGTGATC CTGCGTGGAG TCGCTGCGGG ATTAGAGCGC 
TACCTCCAAG AACGGCCTCT CTTCCGTTCC GTTTGTCCGG ACCAAGAGTT GTTTGTGATG 
CCGATCTTTA ATTTGCAGCG CTACGCGCCT GGAGAGGGGT TTAAACGGTG GCATTGCGAC 
TGGACGATGA GTGATGAAGC AACTGAACCC GTTCATCGTG TGTTGGCTTG GATTTTGTAC 
TGCAACTCAG TCGAGGAAGC GGGCACAGAA TTCCATTGGC AGAAGCATCA TGAACCGGCC 
GTACGAGGCA AATTAGTGAT TTTTCCGGCA GGTCCATCCC ACATTCATCG TGGACGAGTC 
AATCAAACGT TCAGCAAGAC AATTGCGACT GGTTGGATCA ATGCGGGGGC ACGTCAAAGT 
TATATCCAGC GCTTAGCAAA GGGCGCAGTA CCTAGCCCTC CTATGCAATA G
 
Protein sequence
MDLIARYQNA GFEAVADGVM AFFDRRTDLQ RPGVAFGSGG GEEPDKVSTD ISLVAIDKTD 
LDAFALSDVI LRGVAAGLER YLQERPLFRS VCPDQELFVM PIFNLQRYAP GEGFKRWHCD 
WTMSDEATEP VHRVLAWILY CNSVEEAGTE FHWQKHHEPA VRGKLVIFPA GPSHIHRGRV 
NQTFSKTIAT GWINAGARQS YIQRLAKGAV PSPPMQ