| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2142 |
|---|
| Symbol | rbgA |
|---|
| ID | 3741929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 2044449 |
|---|
| End bp | 2045327 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637772340 |
|---|
| Product | ribosomal biogenesis GTPase |
|---|
| Protein accession | YP_378143 |
|---|
| Protein GI | 78185709 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGCAC CTCCGATTCA GTGGTACCCA GGCCACATCG CCAAGGCGGA GCAGCAGCTC
AAACGCAACC TCGAAAAGGT TGATCTGGTG ATTGAGGTGC GTGACGCCCG CATTCCTTTG
GCCACAGGGC ACCCCCATCT GAACCGTTGG TTGAAAGGGA AGCAGCATTT GTTGGTGATC
AACCGACGCG ACATGGTCAC CAAGGAGGCA TGGGCGGCTT GGGAGCAGTG GTTTAAGGCC
AAAGGCCAGC GAACGGTTTG GTGTGATGCC AAAGCCGGGA CTGGGGTGAA GCAAGTGCAG
CAGGCAGCGA TCCGGGCTGG GGATCAACTG AATGAGCGCC GACGAAATCG TGGGATGCGC
CCGCGAGCCG TGCGAGCCCT CACCCTCGGT TTTCCCAACG TTGGTAAATC GGCCTTGATC
AATCGATTGG TCAAAAAAAA GGTGGTGGCC AGTGCCCGGC GGGCGGGAGT CACTCGCACC
CTGCGTTGGG TGCGGCTTGG CCAAGACTTG GATCTGCTCG ATGCTCCAGG TGTTCTTCCA
CCCCGCTTGG ATGATCAACA GGCTGCGTTG CACCTTGCAC TCTGTGATGA CATTGGCCAG
GCGGCTTACA ACGGCGAGTT GGTGGCTCAG GCCTTTTTGC AGCTGTTGAT TGATTCGTCG
GAACGTAAGG CGTCTGGGGT GGTGCTCAGT GTGTTGGGAA CGCGGTATGG CATTCCCGTG
GCCGGTCAGA CCCTTGATCC CCTCTATTGG CTAGAGGCTG CTGCGGCGCG ACACACCTCA
AACGACACTG CTCGCATGGC GCAGCGGCTT TTGGATGATT TTCGTAAATC CGCTTTGGGC
AACATCGCCT TGGAATTGCC GGAGCTTCTC AACCGTTGA
|
|---|
| Protein sequence | MSAPPIQWYP GHIAKAEQQL KRNLEKVDLV IEVRDARIPL ATGHPHLNRW LKGKQHLLVI
NRRDMVTKEA WAAWEQWFKA KGQRTVWCDA KAGTGVKQVQ QAAIRAGDQL NERRRNRGMR
PRAVRALTLG FPNVGKSALI NRLVKKKVVA SARRAGVTRT LRWVRLGQDL DLLDAPGVLP
PRLDDQQAAL HLALCDDIGQ AAYNGELVAQ AFLQLLIDSS ERKASGVVLS VLGTRYGIPV
AGQTLDPLYW LEAAAARHTS NDTARMAQRL LDDFRKSALG NIALELPELL NR
|
|---|
| |