Gene Syncc9902_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2109 
Symbol 
ID3742758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2011974 
End bp2013038 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content63% 
IMG OID637772307 
ProductNifS-like aminotransferase class-V 
Protein accessionYP_378110 
Protein GI78185676 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCCT ATTGGAGTGA CCATTGGGGC AATCCCTCGA GCCGTCAACA TCGCCAGGGC 
CTCACCGCCT CCGCTGCCGT GGCCCTAGCG CGGCGCCAGA TCGCAGAGGC CCTCGACATC
GATCCCAATC GATTGATTTT TACTAGCGGC GCCACCGAAG CCAACAATTT GGCCCTGCTT
GGCCATGCGC GAACCCATGG TTGCGGTCAT GTGATCAGCG TGAATACGGA ACACCACGCT
GTGTTGGATC CCCTCGCACA ACTGCAACGG GAAGGATTCC AGGTTTCGCT GCTCCAAGCC
CAGTCCAATG GCTTGATCAC GCCAGCCCAA CTTGAGGAAG CGATCAGGCC GGACACGCGT
TTGGTGAGCG TCATGGCCGC CAACAATGAA ATCGGCGTCT TGCAGCCCCT GAAAGAACTC
GCAGAGATCT GCCGAAATCG CGGGGTCGTC TTTCACAGCG ATGCAGCGCA AGCCTTTGGA
CACATCCCGC TCGAACCGGA CAACCTGGGG CTTGATCTCG TCAGCCTCAG CGCTCACAAG
CTCTACGGCC CCAAAGGCAT CGGCGCCCTG GTGATCCGCG AGGGGGTTCA GCTACAGCCC
CTGCAATGGG GGGGTGGCCA GGAGGCAGGC CTTCGCGCTG GCACGCTGCC CAGCCCTTTA
ATCGTGGGCT TTGCCGCGGC CGTGCAAGAG GCGATGGCGG ATCGAGATGA ACGCCACACA
CGGCTTGGTG GGCTGAGGGA TGAACTCTGG AACGGGCTCA ACGATCAACT CCCCGCCGTG
GAACGCAACG GCGCCGCAGC TCCCCGCTTA GCCAACAACC TCAACATCAC TCTTCCTGGC
ATGAGCGGCA GCCGCCTGCA TCGCAGCCTT CGGCCCCATC TCGCCTGTAG CAGCGGTTCC
GCCTGCAGCA ACGGCGCCCC CTCCCATGTG CTTCTGGCCA TCGGACGTTC ACGCGCCGAT
GCAGAGGCCT CCCTCCGCCT CAGCCTGGGA CGTTCGACCA CCGCCAACGC GGTCGAACAA
GCCATCGCAA GCATCGTTGA AGCCGTGGCT GCACAACAAA CCTGA
 
Protein sequence
MAPYWSDHWG NPSSRQHRQG LTASAAVALA RRQIAEALDI DPNRLIFTSG ATEANNLALL 
GHARTHGCGH VISVNTEHHA VLDPLAQLQR EGFQVSLLQA QSNGLITPAQ LEEAIRPDTR
LVSVMAANNE IGVLQPLKEL AEICRNRGVV FHSDAAQAFG HIPLEPDNLG LDLVSLSAHK
LYGPKGIGAL VIREGVQLQP LQWGGGQEAG LRAGTLPSPL IVGFAAAVQE AMADRDERHT
RLGGLRDELW NGLNDQLPAV ERNGAAAPRL ANNLNITLPG MSGSRLHRSL RPHLACSSGS
ACSNGAPSHV LLAIGRSRAD AEASLRLSLG RSTTANAVEQ AIASIVEAVA AQQT