| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2070 |
|---|
| Symbol | |
|---|
| ID | 3742572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1978775 |
|---|
| End bp | 1979332 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637772267 |
|---|
| Product | thioredoxin-like protein TxlA |
|---|
| Protein accession | YP_378071 |
|---|
| Protein GI | 78185637 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4232] Thiol:disulfide interchange protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGTA GCCCTCAGCC CATGCCGCTG GGCCGGCTTC AGCAGGTTGT CCTCGTGGTG
ATCGCAGTCG CACTGGCCAT TGGACTTCTA TTCATGCGGG GAGGAATCCA AAGTGAAACC
CCGATGGAAC AACTTGCCCG ACGCTCGGTT GAACCGGAGG TTGCTCTCAC CAACGGCAAA
CCAACGATGA TCGAGTTCTA CGCCGATTGG TGCCAAGTGT GTCGGGAGAT GGCCCCAGCG
ATGCTGGAGC TTGAGCGATC GACGCAAAAC CGTCTTGACG TTGTTTTGGT GAATGTTGAT
AACCCCCGTT GGCAAGACCT GGTGAATCGC TACGAAGTGA ATGGGATACC GCAACTCAAT
TTGTTTTCGG CAGACGGCCA ACCCCGCGGC AAATCGATTG GCCTACGAAA ACCAGAGGAA
CTACAAGCCA TCAGTGCAGC ACTGATGAAT GATCAACCGC TACCGCAACT TCGAGGCGTG
GGAAGCGTCA GCAGCCTCGA AGGTGAGAAC ACATTTCAAG CATCGGTGGT GCAAACCGGT
CCTCGAAGCC ACAGCTGA
|
|---|
| Protein sequence | MTGSPQPMPL GRLQQVVLVV IAVALAIGLL FMRGGIQSET PMEQLARRSV EPEVALTNGK
PTMIEFYADW CQVCREMAPA MLELERSTQN RLDVVLVNVD NPRWQDLVNR YEVNGIPQLN
LFSADGQPRG KSIGLRKPEE LQAISAALMN DQPLPQLRGV GSVSSLEGEN TFQASVVQTG
PRSHS
|
|---|
| |