| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2068 |
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| Symbol | |
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| ID | 3743436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1976216 |
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| End bp | 1978318 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637772265 |
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| Product | soluble lytic transglycosylase |
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| Protein accession | YP_378069 |
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| Protein GI | 78185635 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGCAG GCCCCCGACT TGGGACCCTT CTCCTGCTGG GGACCACAGC CCTGAGTGGC
TTCGCCGCCT GGGGTGGGCA GCGGCTTCTC GTGCATAGGC ATCAGCCCTT AACGCCGGAT
CAATCTGCAG CGCAACTTTG GACGACCTAC CGCTGGGCGA TTGATCCCCA ACAGCGCCGC
GAAGCCGCGC TGTTGATGGC TGCTCAAACG GGTTCATTCG ACGCCTTACA AAGCCAGGCT
TGGGGAACGA ATCCACTGGG AGCGGTGGCC TTAGAACAAG AGGCGGAGAC GGCCACCAGA
CGGGGAGATC AAAGCCACGC CCGCAAGCTT TGGCACGATC TGCTCAAACG TTTCCCATAC
GCAGCTGCAT CCGCATCGGC CCGCCACGTT CTCGGGGACC AAAACCCAGC ACTGCATCAA
GACTTACTGA AGCAACAGCC GAGCCATCCA GCGGCGTTGA GTGTGGCGGC ATCCATGGAT
CCAAATCCAA ACACGGGCCA TCAGGGAGCG ATTCACCTCG CCCGCTGGGG AGCACGTTGG
CCAGGTGCGT TCAAGCGCAT CAGCCAGGCA TGCAACGACA CCAGTTCGAT CGCTCCAGCA
ACCAAGGATC GCGACGTACT GGCTCGGGGC CTAGCCAGCC TGGGGGATGG CCCAGGAGCA
CTGGAGTGCC TTCAACGCCA ACAACCTGGG GCAACGTCCC AACGTTCCAG TGATCCCTCC
ACGCAACTCG CGATTGGACG AGCCTTACTT CGAGGCGGAC AGACCGAAGA AGGCACGGAA
CTGCTTTTGA GCCTCACCCG TGATCACCCA CAGGCTTCGG CCAGCATTGA GGCTGCTCGC
CTGCTGAGCG AACCCTTGCG ACCCTCGAGG GAGGTGCTCG ATGCCATTCC GGTATCTGTC
AAAAAGCGTT CCGCCGCCCT AGCGGCAGCC CGCGTTCGGC TGGCCAACGG TGAAGGTGCG
GGGGAGGTTC TGCAGCAATG GCCGGATGAT CCAGACGTTT GGCAACTGCA ATGGGACCTC
GCCAGAGAAG CCCTGCTGGC GGAGAACTGG GACCGGGCCA AAACCATCCT GACCCGTGAG
CCAAGCTCAC AAGCCTTGCC CGATCCGCTG GAAACTCGAC GGCTGTACTG GCTTGGCTGG
AGCGAAGCAC AACTGGGGAA TCAAGACCGG AGCAGAGCGA TCTGGCAGCT GCTGACCAGC
CAATTCCCCC CTGGCTATTA CCACTGGCTT GCAAGCGAAG CGCTTGGAGA TGCCGAACCC
CTCAACCTGA CCAAAGCCTC AACGCCAAGG CCATCACAGG AGATGTCCTG GGCCCCCTTG
AACAGTGACA AGTCCTTCGT CAATACGCTC TGGCGTCTTG GGCTCGAGCG CCAAGCCTGG
GAGACCTGGC GCAGCGGGAT TGATCCCAGC ACACCACAAC CCAAGCCAGA ACAATTGGTC
GAAGGCAGGC TTCGCTTGGC CGTTGGAGAC AGCTGGATGG CTCTCGATCA ATTGCGGTGG
CTCAACCTGC GCTGGCGGTC AGCCAACTGC CGTGCACGAA TCGACCTTCA ACACAGCCAA
CACCCGCGCA TCTTTGAAGA GGTCCTCCGT CCAGCAGCGA ACTCCCAAAA ACTGCCTCTC
GAGCTGCTCT TCGCCGTCAG CAAACAAGAA TCTCGATTCG CATCAGGCGT GACCTCCACT
GCGGGAGCGA TTGGCCTCAT GCAATTAATG CCAGCCACCG CCAGAGAACT CGCGGGAGCT
CAGCTGACAG AGGACGAAAT CAGAGAGCCG AAGCAAAACG CCGAACTGGG TGCGACCTAC
CTACGGCAAC TACTTCAGCA ATGGCAAGGA GATCCCTTTC GCAGCATCGC TAGCTACAAC
GCTGGCCCCG GAGCTGTGGG GTCATGGTCG ACTCAAGATC TCAACGATGC ACCTGCCCTA
TGGGTGGAGC GCATTCCCTA TCCGGAAACG CGCTACTACA CCAAAAAAGT TCTCGACAAT
TTGTTTGGCT ACTTAGGTAG GGACAAGGTT TTTTGCAAAC CAACCCTGGG CGGGGTTGGG
CAACAAATGA CCCAGACCAA TGCCCGTGAA CACAATGAAG GCCATCAAGA ACATCGACGT
TGA
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| Protein sequence | MNAGPRLGTL LLLGTTALSG FAAWGGQRLL VHRHQPLTPD QSAAQLWTTY RWAIDPQQRR
EAALLMAAQT GSFDALQSQA WGTNPLGAVA LEQEAETATR RGDQSHARKL WHDLLKRFPY
AAASASARHV LGDQNPALHQ DLLKQQPSHP AALSVAASMD PNPNTGHQGA IHLARWGARW
PGAFKRISQA CNDTSSIAPA TKDRDVLARG LASLGDGPGA LECLQRQQPG ATSQRSSDPS
TQLAIGRALL RGGQTEEGTE LLLSLTRDHP QASASIEAAR LLSEPLRPSR EVLDAIPVSV
KKRSAALAAA RVRLANGEGA GEVLQQWPDD PDVWQLQWDL AREALLAENW DRAKTILTRE
PSSQALPDPL ETRRLYWLGW SEAQLGNQDR SRAIWQLLTS QFPPGYYHWL ASEALGDAEP
LNLTKASTPR PSQEMSWAPL NSDKSFVNTL WRLGLERQAW ETWRSGIDPS TPQPKPEQLV
EGRLRLAVGD SWMALDQLRW LNLRWRSANC RARIDLQHSQ HPRIFEEVLR PAANSQKLPL
ELLFAVSKQE SRFASGVTST AGAIGLMQLM PATARELAGA QLTEDEIREP KQNAELGATY
LRQLLQQWQG DPFRSIASYN AGPGAVGSWS TQDLNDAPAL WVERIPYPET RYYTKKVLDN
LFGYLGRDKV FCKPTLGGVG QQMTQTNARE HNEGHQEHRR
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