Gene Syncc9902_2051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2051 
SymbolpyrB 
ID3743419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1959468 
End bp1960517 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content56% 
IMG OID637772248 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_378052 
Protein GI78185618 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGTT GGCATCACCG TCACATCCTT GATCTGGCCT CATTCTCTCG GGACGATTTT 
GCCTCGATCC TTGAGCTGGC TCAACGGTTT CGATCCCTTC CCGTCACGGG TGTACGCAAG
TTGCCGGCGC TGCAGGGACG TCTAGTGGCC ACGCTGTTTT TTGAGCCCAG TACTCGCACG
CGAAGCAGTT TCGAATTAGC GGCAAAGCGG CTCTCAGCCG ATGTCATGAG TTTTTCTCCC
TCAAGTAGTT CGCTGAGTAA GGGAGAAAGC GTTTTGGATA CCGCTCGCAC CTACGTCGCT
ATGGGTGCTG ACGTGTTGGT GGTTCGTCAT CGCTCCACAT CCGTTCCTCA GCAACTTGCC
GCTGATTTGG ATCAGCTGGG GGAGCGCACC GTGGTGCTGA ATGGAGGAGA TGGTCTTCAT
AGCCATCCAA GTCAGGGTTT GTTGGATCTG CTCACCCTGG CCCGTTACTT CGATGCCCAG
AAGCCAACCC CACAAGCTTT GGACGGTAAA AAAATCGTGA TTGTTGGAGA CATCCTGCAT
TCCCGCGTGG CCCGCTCCAA TCTTTGGGCA CTGACTGGTT GTGGCGCGGA TGTGGTGCTG
TGTGGGCCAA CCAGTTTGTT GCCAGAGGAG TTTGCTGCGT TTGTTGATGC CCCACCGCCA
GGGCTGTCGT GCGATCCCGT CGCTCAGCGC GGAAAGGTCA CCGTTGAACG CCGTCTTGAA
CAAGCCTTGC CCGGTGCAGA TGCAGTGATG ACACTGCGAC TCCAGAAGGA GCGCATGACA
CAGCAGTTGT TGACCAGTCT CGAGCGCTAC CACCGTGACT ATGGCTTGAG CCATGCGCGC
CTTCAATTGT GTGGTCGACA GGTTCCCGTT CTTCATCCAG GACCTGTAAA CCGGGGCGTT
GAGATGACGA GTCAGTTGTT GGATGACCCA ACCATATGCC TTGTGGAAGA GCAAGTCAGG
AATGGGGTTC CTGTTCGCAT GGCGCTGCTT TATTTGATGG CAGCAGCTGA GTCCGCCGCG
GAATCCTCAT TGGTATCGAT CAGCTCTTGA
 
Protein sequence
MSGWHHRHIL DLASFSRDDF ASILELAQRF RSLPVTGVRK LPALQGRLVA TLFFEPSTRT 
RSSFELAAKR LSADVMSFSP SSSSLSKGES VLDTARTYVA MGADVLVVRH RSTSVPQQLA
ADLDQLGERT VVLNGGDGLH SHPSQGLLDL LTLARYFDAQ KPTPQALDGK KIVIVGDILH
SRVARSNLWA LTGCGADVVL CGPTSLLPEE FAAFVDAPPP GLSCDPVAQR GKVTVERRLE
QALPGADAVM TLRLQKERMT QQLLTSLERY HRDYGLSHAR LQLCGRQVPV LHPGPVNRGV
EMTSQLLDDP TICLVEEQVR NGVPVRMALL YLMAAAESAA ESSLVSISS