| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1980 |
|---|
| Symbol | truA |
|---|
| ID | 3741825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1882728 |
|---|
| End bp | 1883630 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637772176 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_377981 |
|---|
| Protein GI | 78185547 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0478647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCGCTG AACCCTCGTC TGCACCCCCT GAGCAGCCAA TCCTCCGACG GATTGCCCTC
AGCCTGCAGT ACGAGGGTTC AGATTTTTGC GGGTGGCAAC GGCAAAACAA TGCCAGGAGT
GTGCAAGCCG TTCTAGAAAC AGCGATTGCT CAACTCGACC CCCTAAGACC AATCCAGAGC
TTTGCTGCTG GACGAACGGA TGCGGGCGTT CATGCTGCAG CCCAAGTGGT GCATTTCGAC
TGTTCAGGAC CCATTCCAGC CGCAAAATGG GCCCCTGCTC TGAACGGTCG ACTACCAGCT
TCGATCAGGG TGCGTGAATC TGTTGAGCGA CCACGGGATT GGCATGCCTG CTACTCCGCT
GTTTACCGGC GTTACCGATA CATCATTCAC AACGGTCGGC GACCCAATTT GTTTCTGACC
CCTTGGACTT GGCACCGATA CCACCATCGA CTCAACGAAG AGAACATGCG GGTTGCCCTT
GAAGGGATGA TCGGCCTCCA TGATTTTGCG GCCTTTATGC GCGCTGGAAG CCGACGCCCC
CACTCACGCA CAACCATCCA GGACGTTCTG GTGGAACGCG AGGGTGACCT CATCCGCGTG
GAAATCCAAG CCAGTGGATT TCTATATGGA ATGGTGCGGC TCTTGATGGC GCAGCTCGTT
GCCGTCGGCG AGCATCGCCT CAGCGTGAAG GCCTTTGAGC AACGCTGGAG AGACCGGCGC
CGAGACCAAG TGAGGGAAGC CGCGCCTGCT AGAGGACTTT GCCTGTTAAG GGCAGGGTAC
GCCGAGCCTA TTTTCAGCGA AGCTGGCTGG TACGATTGCC AACCGTGGTT TTCTTTGGCG
ACGGATGATC CCCCCCCGGA TCCTCCTTGT TTTGCTAAGG ACGAGCAACA AGAACTCCAA
TGA
|
|---|
| Protein sequence | MTAEPSSAPP EQPILRRIAL SLQYEGSDFC GWQRQNNARS VQAVLETAIA QLDPLRPIQS
FAAGRTDAGV HAAAQVVHFD CSGPIPAAKW APALNGRLPA SIRVRESVER PRDWHACYSA
VYRRYRYIIH NGRRPNLFLT PWTWHRYHHR LNEENMRVAL EGMIGLHDFA AFMRAGSRRP
HSRTTIQDVL VEREGDLIRV EIQASGFLYG MVRLLMAQLV AVGEHRLSVK AFEQRWRDRR
RDQVREAAPA RGLCLLRAGY AEPIFSEAGW YDCQPWFSLA TDDPPPDPPC FAKDEQQELQ
|
|---|
| |