Gene Syncc9902_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1945 
Symbol 
ID3742004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1860746 
End bp1861621 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content59% 
IMG OID637772141 
Productarogenate dehydrogenase 
Protein accessionYP_377946 
Protein GI78185511 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.877441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGGG AAACAAAACG CGTCGGCATC GTTGGACTCG GGCTCATCGG GGGATCGTTG 
GGCTTGGATC TGCAGGCCAA GGGTTGGGAT GTGCAGGGAT TAGTCCATCG TTCAGTGACG
GCTGAACGGG CGAAAGAGCG CGGTTTGGTG TCGGATGTGA GTACGGATCC CGCCTGTTTG
GCCGGCTGTG ATTTGGTGAT CTTGGCGTTG CCGATTCCCC TTTTGTTGCA TCCCGAGCCC
TCGTTGCTTG AGGCGTTGCC TGCAGAGGCG GTGGTTACGG ATGTGGGATC GGTAAAACAG
CCAGTGCTGG AGGCCTGGCG AGACCGTCAT CCTCGATTTG TGGCCAGCCA TCCAATGGCG
GGAACTGCGT TGGCGGGAGT CGAGGCAGGG ATCAAAGGTT TGTTTCGAGG CCGTCCTTGG
ATTGCCACTC CAGAGCCAAA AACGGATGCA TCGGCGTTAG CGATGGTTCA GTCCCTAGCC
CTCAGCCTGG GGAGTCATTG GTTGACGGCT GCCGCTGCAC AACATGACCA GGCGGTGGCT
CTGATCTCCC ATATGCCCGT TTTGGTGAGT GCGGCATTGT TGCGGGCCGT TGGAGATGAG
CGTGATCCAG AGATTCGACG CTTAGCGCTT GTTTTGGCGT CCAGTGGATT TGCCGACACA
ACACGGGTTG GTGGTGGAAA TCCCGACCTC GGTGTGGCGA TGGCTTCGAC GAATCGTGGG
GCGTTGCTTC GGAGCCTCGC GGCGTATCGA TGGAGTCTTG AACAGCTTGA GGATGCTGTG
CTGCAGGAGA ACTGGCCTCA GCTCCAGATC GAATTGAAAA GAACCCAGGC TTTGCGGCCG
GGGTTCCTGG AGACGCCAGA TGGCGTCAGC GATTGA
 
Protein sequence
MARETKRVGI VGLGLIGGSL GLDLQAKGWD VQGLVHRSVT AERAKERGLV SDVSTDPACL 
AGCDLVILAL PIPLLLHPEP SLLEALPAEA VVTDVGSVKQ PVLEAWRDRH PRFVASHPMA
GTALAGVEAG IKGLFRGRPW IATPEPKTDA SALAMVQSLA LSLGSHWLTA AAAQHDQAVA
LISHMPVLVS AALLRAVGDE RDPEIRRLAL VLASSGFADT TRVGGGNPDL GVAMASTNRG
ALLRSLAAYR WSLEQLEDAV LQENWPQLQI ELKRTQALRP GFLETPDGVS D