Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1945 |
Symbol | |
ID | 3742004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1860746 |
End bp | 1861621 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637772141 |
Product | arogenate dehydrogenase |
Protein accession | YP_377946 |
Protein GI | 78185511 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.877441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGGG AAACAAAACG CGTCGGCATC GTTGGACTCG GGCTCATCGG GGGATCGTTG GGCTTGGATC TGCAGGCCAA GGGTTGGGAT GTGCAGGGAT TAGTCCATCG TTCAGTGACG GCTGAACGGG CGAAAGAGCG CGGTTTGGTG TCGGATGTGA GTACGGATCC CGCCTGTTTG GCCGGCTGTG ATTTGGTGAT CTTGGCGTTG CCGATTCCCC TTTTGTTGCA TCCCGAGCCC TCGTTGCTTG AGGCGTTGCC TGCAGAGGCG GTGGTTACGG ATGTGGGATC GGTAAAACAG CCAGTGCTGG AGGCCTGGCG AGACCGTCAT CCTCGATTTG TGGCCAGCCA TCCAATGGCG GGAACTGCGT TGGCGGGAGT CGAGGCAGGG ATCAAAGGTT TGTTTCGAGG CCGTCCTTGG ATTGCCACTC CAGAGCCAAA AACGGATGCA TCGGCGTTAG CGATGGTTCA GTCCCTAGCC CTCAGCCTGG GGAGTCATTG GTTGACGGCT GCCGCTGCAC AACATGACCA GGCGGTGGCT CTGATCTCCC ATATGCCCGT TTTGGTGAGT GCGGCATTGT TGCGGGCCGT TGGAGATGAG CGTGATCCAG AGATTCGACG CTTAGCGCTT GTTTTGGCGT CCAGTGGATT TGCCGACACA ACACGGGTTG GTGGTGGAAA TCCCGACCTC GGTGTGGCGA TGGCTTCGAC GAATCGTGGG GCGTTGCTTC GGAGCCTCGC GGCGTATCGA TGGAGTCTTG AACAGCTTGA GGATGCTGTG CTGCAGGAGA ACTGGCCTCA GCTCCAGATC GAATTGAAAA GAACCCAGGC TTTGCGGCCG GGGTTCCTGG AGACGCCAGA TGGCGTCAGC GATTGA
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Protein sequence | MARETKRVGI VGLGLIGGSL GLDLQAKGWD VQGLVHRSVT AERAKERGLV SDVSTDPACL AGCDLVILAL PIPLLLHPEP SLLEALPAEA VVTDVGSVKQ PVLEAWRDRH PRFVASHPMA GTALAGVEAG IKGLFRGRPW IATPEPKTDA SALAMVQSLA LSLGSHWLTA AAAQHDQAVA LISHMPVLVS AALLRAVGDE RDPEIRRLAL VLASSGFADT TRVGGGNPDL GVAMASTNRG ALLRSLAAYR WSLEQLEDAV LQENWPQLQI ELKRTQALRP GFLETPDGVS D
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