Gene Syncc9902_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1911 
Symbol 
ID3742754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1827674 
End bp1828444 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content57% 
IMG OID637772106 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_377912 
Protein GI78185477 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCGC TCAGCGAGCA CCAAGTGATC GCCAACCTGC GGCGGCAGGA GGATGCATCA 
GACCGGTATT ACGCCGCCTG GTGGTTAGGG AAAATGCGCA GTCAGCATCC CGATGCTGTG
CCGTTGCTGC TTGGAACCCT CTCAGCCTTA AGTGAAGACC CCGTGAATGA AGAGGACCGA
GGCGTTGCAC TCAATGCCAT TCGAGCTCTT GGGCTTCTGC TCAATCCAGC CGCCAACGAC
CCACTGATTC AACTTCTTTC ATCAACGGAC TACACGGTGC GCGAAGAGGC CGCACGAAGT
CTCGGCGCGA TGCAAACGAA GGAGGCTCTT CCCCAAATGT GCCACCTCTT GAGAAGTGGG
CCTGCCGCAT CCGGAGGCGA GCAAGTGGGC TCATCAACAT TGAACGAACC CTGTGAGGCC
CTACTCGAAG CCTTGGGGAA CATCGGCGTG AGTAGCCCAG ACGTTCTCAA CGTGATTACT
CCGTTCACTC ACCACCCTCG CCCTTTGGTT CGCGCAGCAG CCTGTCGTGC CCTCCTTCAG
CTCATGAAAG AGCAGCGTTG GGCAGTTGAG TTGGAAAAGC TGCTTCAACA TCCTGAGCCA
CTGGTTCGGC GTGGAGTGTT GTTGGATCTA GGCGCCACTG GCTGGACAGC AGCCCTTCCA
GCGATCGAAT CCGCCAGCGT TGAAGCCAGT CTCAAATTGG TGGCGTTGCG AGGTCTTGCC
GAACAAAGCG AAGACACCAA GGTGTTGGAT GCAATGGACC GACTGCTCTG A
 
Protein sequence
MEPLSEHQVI ANLRRQEDAS DRYYAAWWLG KMRSQHPDAV PLLLGTLSAL SEDPVNEEDR 
GVALNAIRAL GLLLNPAAND PLIQLLSSTD YTVREEAARS LGAMQTKEAL PQMCHLLRSG
PAASGGEQVG SSTLNEPCEA LLEALGNIGV SSPDVLNVIT PFTHHPRPLV RAAACRALLQ
LMKEQRWAVE LEKLLQHPEP LVRRGVLLDL GATGWTAALP AIESASVEAS LKLVALRGLA
EQSEDTKVLD AMDRLL